Sediminibacterium sp. TEGAF015: TEGAF0_18360
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Entry
TEGAF0_18360 CDS
T08564
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt01501
beta-Lactam resistance
sedt01503
Cationic antimicrobial peptide (CAMP) resistance
sedt02020
Two-component system
sedt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TEGAF0_18360
09132 Signal transduction
02020 Two-component system
TEGAF0_18360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TEGAF0_18360
01503 Cationic antimicrobial peptide (CAMP) resistance
TEGAF0_18360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedt02000
]
TEGAF0_18360
02044 Secretion system [BR:
sedt02044
]
TEGAF0_18360
01504 Antimicrobial resistance genes [BR:
sedt01504
]
TEGAF0_18360
Transporters [BR:
sedt02000
]
Other transporters
Pores ion channels [TC:
1
]
TEGAF0_18360
Secretion system [BR:
sedt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
TEGAF0_18360
RTX toxin transporter
TEGAF0_18360
Multiple protein transporter
TEGAF0_18360
RaxAB-RaxC type I secretion system protein
TEGAF0_18360
Antimicrobial resistance genes [BR:
sedt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
TEGAF0_18360
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
TEGAF0_18360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Big_5
Motif
Other DBs
NCBI-ProteinID:
BDQ12619
LinkDB
All DBs
Position
2048685..2050085
Genome browser
AA seq
466 aa
AA seq
DB search
MYKRIKMFSVLSLLMLAGATNAQKANRYEFSVQQAVAFAQKNNVQVKNALLAIQAQMQTN
KEITASALPTISGSIGANHLPNVAVQTLPNFISPATYQVLVNEGVKDGNGNPIKMPNDFG
FIAAQFGTKWNSTVGVSLQQLLFDGQVFIGLQARKASIDFQEAAAKVTEENIKTNIYKVY
YQLVVSKTQIELLDANIKRLQKLDYDVKALYKNGFAERIDIDKIEVQLNNLSTEKIKALN
SIAMGYIGLKTLMGMPAADTLVLTDTLDYNQIKEDVTSQEYNYQDRKDFQYLTSARQLNT
YNVKRYELSKLPTVALGASYSKLAQRNQFNFFGKGDWFTASSIGLNISVPIFSGFAKDAR
IKKAKIELEQTSNQLENLKLNIDQSVEQARLKYKTAIATLDFQKNNMTLAEKVYQQTKKK
YEAGTGSNTEINAADVDLKAAQTNYISALYDAIIARVDYLTATGKL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcgaatcaaaatgttcagtgtactgagtttattgatgctggctggtgcaacc
aatgcacaaaaagccaacagatacgaatttagtgtgcaacaagcagtggcatttgcacag
aagaacaatgtgcaggtaaaaaatgccttattggctattcaggcccagatgcaaactaac
aaagaaattacagcatctgctttaccaacaatatcaggttcaattggtgcaaatcattta
cccaatgtagccgtacaaacacttccaaactttatttctcccgcaacctatcaggtgttg
gttaatgaaggtgttaaagacgggaacgggaacccgataaaaatgccaaacgattttggc
tttattgctgcccaattcggaacgaagtggaattcaactgttggtgtttccctgcaacaa
ttgctgttcgacggacaggtgtttattggtttacaggcaaggaaagcttccattgatttt
caggaagctgctgcaaaagttaccgaggaaaatatcaagacgaatatttacaaagtatac
taccagctagtagttagtaaaacacagattgaattgctagatgccaatatcaaaagattg
cagaaactagattatgatgtaaaagccttatacaaaaatggctttgcagaaagaattgat
attgataaaatagaagtacaactaaacaacttaagcaccgaaaaaatcaaagcattgaat
agcattgctatgggctatattggacttaagacattgatgggaatgcctgctgcagatacc
ctggtactaacggatacacttgattacaatcaaatcaaagaagatgtaacaagccaggag
tacaactaccaggatcgtaaagactttcaataccttacttcggccagacaattaaatact
tacaatgtaaaaaggtatgagctgagcaaactaccaacagttgcactgggagcttcctat
agtaagttggcacaaagaaatcaatttaacttttttggaaaaggtgattggtttaccgca
tcctccattggattaaatatctctgtccccatttttagtggattcgccaaagatgccaga
attaaaaaagccaagattgaattggaacaaaccagcaatcaattagaaaatctgaagtta
aatattgatcagtcggttgagcaggctagactgaaatacaaaaccgccattgccacttta
gattttcagaaaaacaatatgacgctggcagaaaaagtatatcagcaaaccaagaagaaa
tacgaagcaggtacaggatcaaatacagagattaatgctgctgatgtagacttaaaagct
gcacaaaccaactatatctctgcattgtatgacgctatcattgcacgagtagattattta
accgcaaccggaaaactataa
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