Sediminibacterium sp. TEGAF015: TEGAF0_21000
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Entry
TEGAF0_21000 CDS
T08564
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt01501
beta-Lactam resistance
sedt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEGAF0_21000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TEGAF0_21000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedt02000
]
TEGAF0_21000
01504 Antimicrobial resistance genes [BR:
sedt01504
]
TEGAF0_21000
Transporters [BR:
sedt02000
]
Other transporters
Pores ion channels [TC:
1
]
TEGAF0_21000
Antimicrobial resistance genes [BR:
sedt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TEGAF0_21000
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
TEGAF0_21000
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
TEGAF0_21000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2937
Motif
Other DBs
NCBI-ProteinID:
BDQ12883
LinkDB
All DBs
Position
complement(2368664..2370100)
Genome browser
AA seq
478 aa
AA seq
DB search
MKQHFQYLLYTGITIIAISCAMPKPVSINKAEILPAAFLQSTDSVNIASLPKKIFFPDPA
LQELIDTAIANNADIRIAVQRIAASKAGVGIAQGLTKPGLDAIVSTGVDKFGDYTMNGLG
NYDMNLSPNIRKDQQIPLNMPDLFVGFRSSWEADVWGKLSNRKKAALNRYLATEQARKWV
TTQLVSQVAELYYELLALDKELEILQRNIKLQENGVEIVKIQKVGGRATELAVQQFTAQL
LGTKSMLNVMKQRITATENLLSAISGKYDFKIKRGAGITDLKLPGEMQIGIPAQLLANRP
DIKEAELLLEAAGAEVEASRKAFLPSLNISAYTALNSFKTSVLFSPQSLTYGLLGGLVTP
VLSKNMLKGNYQLASAAQQEAFELYRKQIVYAYHEVQTNLSGIDQYNKIYDLKVQETKSL
QAAVASSNDLYMGGAATYLEVVTAQRGVLEAELDQINSKKTVFVYLINLYRSLGGGWN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacattttcaatatttactatatacaggaataacaatcatagctatttcctgt
gccatgcccaagcccgtttccattaataaagcagagattctgcctgcagcttttctgcaa
tcaactgatagtgtaaatattgcgtctcttcctaaaaaaatattttttcctgatccggct
ttacaggaattaattgatactgctattgccaataatgcagatatcagaattgctgtacaa
agaattgctgcatcaaaagctggtgtaggcatagcgcagggtttaaccaaacccggattg
gatgcaatcgtgtcaactggggtagacaaatttggagattataccatgaatggcctgggt
aattatgatatgaacctttctcccaatatccggaaagaccaacagatacctttgaatatg
cctgacttgtttgtaggtttcagaagtagctgggaagcagatgtctgggggaaattatca
aaccggaaaaaagcagcactgaaccgataccttgcaactgaacaagcaagaaaatgggtt
actactcaactggtttctcaggttgcagaactgtattacgaacttttagccttggataag
gaattagaaatattacaacgaaatattaaacttcaggaaaatggagtggaaattgtaaaa
attcaaaaagttgggggaagggcaacagagctcgcagttcagcaatttacggcacagtta
ctgggaaccaagagtatgctgaatgtgatgaaacaacggattactgctactgaaaatcta
ttaagtgccatttccggcaaatacgatttcaaaatcaaaagaggggctggcatcaccgat
ttaaaactacctggagaaatgcaaattggcatacctgctcaattattagccaacagacca
gatattaaagaagctgaattactattggaagctgctggagctgaagttgaagccagcaga
aaagcatttttgccctcactgaatataagcgcatatactgcattaaacagcttcaaaaca
tctgtactttttagccctcagtctttaacctatggattattgggtggtcttgttactcct
gttctaagcaaaaacatgttaaagggaaattatcaattggccagtgctgctcagcaggaa
gcatttgaattgtacagaaagcaaattgtctatgcctaccatgaagtgcaaaccaatctt
agtggaatagaccagtacaataaaatttatgaccttaaagttcaagaaacaaagagttta
caggcagctgttgcatcttccaatgacctctatatgggtggagcagctacttatctggaa
gtagtgactgcacaaagaggtgttctggaagccgaactggatcaaatcaattccaagaaa
actgtttttgtttacctgattaacttatataggtcattggggggtggttggaattaa
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