Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_22905
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Entry
CFSAN002050_22905 CDS
T02734
Symbol
tolC
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec01501
beta-Lactam resistance
seec01503
Cationic antimicrobial peptide (CAMP) resistance
seec02020
Two-component system
seec03070
Bacterial secretion system
Module
seec_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CFSAN002050_22905 (tolC)
09132 Signal transduction
02020 Two-component system
CFSAN002050_22905 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFSAN002050_22905 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
CFSAN002050_22905 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seec02000
]
CFSAN002050_22905 (tolC)
02044 Secretion system [BR:
seec02044
]
CFSAN002050_22905 (tolC)
01504 Antimicrobial resistance genes [BR:
seec01504
]
CFSAN002050_22905 (tolC)
Transporters [BR:
seec02000
]
Other transporters
Pores ion channels [TC:
1
]
CFSAN002050_22905 (tolC)
Secretion system [BR:
seec02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CFSAN002050_22905 (tolC)
RTX toxin transporter
CFSAN002050_22905 (tolC)
Multiple protein transporter
CFSAN002050_22905 (tolC)
RaxAB-RaxC type I secretion system protein
CFSAN002050_22905 (tolC)
Antimicrobial resistance genes [BR:
seec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CFSAN002050_22905 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CFSAN002050_22905 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5607
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AGQ74456
LinkDB
All DBs
Position
4409495..4410964
Genome browser
AA seq
489 aa
AA seq
DB search
MKKLLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNETSASLQLTQTLFDMSKWRGLTLQEKAAGIQDVTY
QTDQQTLILNTANAYFKVLNAIDVLFYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEELRQVTGNYYPELASLNVEHFKTDKPKAVNALLKEAEN
RNLSLLQARLSQDLAREQIRQAQDGHLPTLNLTASTGISDTSYSGSKTNSTQYDDSNMGQ
NKIGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSI
NAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAKQQLANARYTYLINQLNIK
YALGTLNEQDLLALNSTLGKPIPTSPESVAPETPDQDAAADGYNAHSAAPAVQPTAARAN
SNNGNPFRH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccatccttatcggcctgagcctgtcggggttcagcacactaagc
caggcagagaacctgatgcaagtttatcagcaagcacgcctgagcaacccggaattgcgt
aaatccgctgccgatcgcgatgctgcattcgaaaaaattaacgaagcgcgtagtccttta
ctgccgcaactgggtttaggtgccgactacacctacagcaacggttatcgcgatgctaac
ggtatcaactccaatgaaaccagcgcttccctgcaattaacgcagacgctatttgatatg
tcgaaatggcgtgggctcaccctgcaagaaaaagcagcaggcattcaggatgtcacctat
cagaccgatcagcagacgctgatcctcaataccgcgaacgcgtattttaaggtattgaac
gctattgatgtgcttttctatacccaggcgcaaaaagaggctatctaccgtcagttagat
caaacgacgcaacgttttaacgtgggtctggtcgccattaccgacgtgcaaaacgcccgt
gcgcaatatgataccgtactggcgaatgaagtgaccgcccgcaacaacctggataacgcg
gtagaagagctgcgccaggtaaccggcaattattacccggagctggcgtcgcttaacgtc
gagcattttaaaaccgacaaacccaaagctgttaatgcgctgctgaaggaagcggaaaac
cgtaacctgtcgctgttgcaggcgcgtttaagtcaggatctggcgcgcgagcaaatccgt
caggcgcaggatggccatctgccgacgctgaatttaacggcctcaaccggcatttctgat
acctcttatagcggttcaaaaaccaactccacccagtacgacgatagcaacatggggcag
aataaaatcggcctgaacttctccctgccgctgtatcaaggcgggatggttaactcgcag
gtaaaacaggcgcagtataacttcgtcggcgcaagcgaacagctggaaagcgcgcaccgt
agcgtggtgcagaccgtacgttcttcctttaacaatattaacgcctccatcagcagcatc
aacgcgtataaacaggcagtcgtttccgcgcaaagttctttggatgcaatggaagccggt
tactcggtcggtacacgtaccattgttgacgtactggatgccaccaccactctgtatgat
gccaagcagcaactggccaacgcgcgttatacctatttgattaatcagttaaatatcaaa
tatgcgctcggtacgctgaacgagcaggatctgctcgcgcttaacagtacgttgggtaaa
cctatcccgacgtcgccggaaagcgtagcgccggaaacgccagatcaggatgctgccgca
gacggttataatgcccatagcgccgcgccggcagtacagccgaccgccgctcgcgccaac
agcaataacggcaatccattccggcattga
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