Salmonella enterica subsp. enterica serovar Thompson: IA1_15400
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Entry
IA1_15400 CDS
T02868
Symbol
tolC
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene01501
beta-Lactam resistance
sene01503
Cationic antimicrobial peptide (CAMP) resistance
sene02020
Two-component system
sene03070
Bacterial secretion system
Module
sene_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IA1_15400 (tolC)
09132 Signal transduction
02020 Two-component system
IA1_15400 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IA1_15400 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
IA1_15400 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sene02000
]
IA1_15400 (tolC)
02044 Secretion system [BR:
sene02044
]
IA1_15400 (tolC)
01504 Antimicrobial resistance genes [BR:
sene01504
]
IA1_15400 (tolC)
Transporters [BR:
sene02000
]
Other transporters
Pores ion channels [TC:
1
]
IA1_15400 (tolC)
Secretion system [BR:
sene02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IA1_15400 (tolC)
RTX toxin transporter
IA1_15400 (tolC)
Multiple protein transporter
IA1_15400 (tolC)
RaxAB-RaxC type I secretion system protein
IA1_15400 (tolC)
Antimicrobial resistance genes [BR:
sene01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IA1_15400 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IA1_15400 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5607
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AGX11774
LinkDB
All DBs
Position
3210871..3212343
Genome browser
AA seq
490 aa
AA seq
DB search
MKKLLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNETSASLQLTQTLFDMSKWRGLTLQEKAAGIQDVTY
QTDQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEELRQVTGNYYPELASLNVEHFKTDKPKAVNALLKEAEN
RNLSLLQARLSQDLAREQIRQAQDGHLPTLNLTASTGISDTSYSGSKTNSAQYDDSNMGQ
NKIGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSI
NAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAKQQLANARYTYLINQLNIK
YALGTLNEQDLLALNSTLGKPIPTSPESVAPETPDQDAAADGYNAHSAAPAVQPTAARAN
SNNGNPFRHR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccatccttatcggcctgagcctgtcggggttcagcacactaagc
caggcagagaacctgatgcaagtttatcagcaagcacgcctgagcaacccggaattgcgt
aaatccgctgccgatcgcgatgctgcattcgaaaaaattaacgaagcgcgtagtccttta
ctgccgcaactgggtttaggtgccgactacacctacagcaacggttatcgcgatgcgaac
ggtatcaactccaatgaaaccagcgcttccctgcaattaacgcagacgctatttgatatg
tcgaaatggcgtgggctcaccctgcaagaaaaagcagcaggcattcaggatgtcacctat
cagaccgatcagcagacgctgatcctcaataccgcgaacgcgtattttaaggtattgaac
gctattgatgtgctttcctatacccaggcgcaaaaagaggctatctaccgtcagttagat
caaacgacgcaacgttttaacgtgggtctggtcgccattaccgacgtgcaaaacgcccgt
gcgcaatatgataccgtactggcgaatgaagtgaccgcccgcaacaacctggataacgcg
gtagaagagctgcgccaggtgaccggcaattattacccggagctggcgtcgcttaacgtc
gagcattttaaaaccgacaaacccaaagctgttaatgcgctgctgaaggaagcggaaaac
cgtaacctgtcgctgttgcaggcgcgtttaagtcaggatctggcgcgcgagcaaatccgt
caggcgcaggatggccatctgccgacgctgaatttaacggcctcaaccggcatttctgat
acctcttatagcggttctaaaaccaactccgcccagtacgacgatagcaacatggggcag
aataaaatcggcctgaacttctccctgccgctgtatcaaggcgggatggttaactcgcag
gtaaaacaggcgcagtataacttcgtcggcgcaagcgaacagctggaaagcgcgcaccgt
agcgtggtgcagaccgtacgttcttcctttaacaatattaacgcctccatcagcagcatc
aacgcgtataaacaggcagtcgtttccgcgcaaagttctttggatgcaatggaagccggt
tactcggtcggtacacgtaccattgttgacgtactggatgccaccaccactctgtatgat
gccaagcagcaactggccaacgcgcgttatacctatttgattaatcagttaaatatcaaa
tatgcgctcggtacgctgaacgagcaggatctgctcgcgcttaacagtacgttgggtaaa
cctatcccgacgtcgccggaaagcgtagcgccggaaacgccagatcaggatgctgccgca
gacggttataatgcccatagcgccgcgccggcagtacagccgaccgccgctcgcgccaac
agcaataacggcaatccattccggcatagataa
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