Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_17605
Help
Entry
CFSAN001992_17605 CDS
T02479
Symbol
tolC
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj01501
beta-Lactam resistance
senj01503
Cationic antimicrobial peptide (CAMP) resistance
senj02020
Two-component system
senj03070
Bacterial secretion system
Module
senj_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CFSAN001992_17605 (tolC)
09132 Signal transduction
02020 Two-component system
CFSAN001992_17605 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFSAN001992_17605 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
CFSAN001992_17605 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senj02000
]
CFSAN001992_17605 (tolC)
02044 Secretion system [BR:
senj02044
]
CFSAN001992_17605 (tolC)
01504 Antimicrobial resistance genes [BR:
senj01504
]
CFSAN001992_17605 (tolC)
Transporters [BR:
senj02000
]
Other transporters
Pores ion channels [TC:
1
]
CFSAN001992_17605 (tolC)
Secretion system [BR:
senj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CFSAN001992_17605 (tolC)
RTX toxin transporter
CFSAN001992_17605 (tolC)
Multiple protein transporter
CFSAN001992_17605 (tolC)
RaxAB-RaxC type I secretion system protein
CFSAN001992_17605 (tolC)
Antimicrobial resistance genes [BR:
senj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CFSAN001992_17605 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CFSAN001992_17605 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5607
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AGF83803
LinkDB
All DBs
Position
complement(3648702..3650171)
Genome browser
AA seq
489 aa
AA seq
DB search
MKKLLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNETSASLQLTQTLFDMSKWRGLTLQEKAAGIQDVTY
QTDQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEELRQVTGNYYPELASLNVEHFKTDKPKAVNALLKEAEN
RNLSLLQARLSQDLAREQIRQAQDGHLPTLNLTASTGISDTSYSGSKTNSAQYDDSNMGQ
NKIGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSI
NAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAKQQLANARYTYLINQLNIK
YALGTLNEQDLLALNSTLGKPIPTSPESVAPETPDQDAAADGYNAHSAAPAVQPTAARAN
SNNGNPFRH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccatccttatcggcctgagcctgtcggggttcagcacactaagc
caggcagagaacctgatgcaagtttatcagcaagcacgcctgagcaacccggaattgcgt
aaatctgctgccgatcgcgatgctgcattcgaaaaaattaacgaagcgcgtagtccttta
ctgccgcaactgggtttgggtgccgactacacctacagcaacggttatcgcgatgcgaac
ggtatcaactccaatgaaaccagcgcttccctgcaattaacgcagacgctatttgatatg
tcgaaatggcgtgggctcaccctgcaagaaaaagcagcaggcattcaggatgtcacctat
cagaccgatcagcagacgctgatcctcaataccgcgaacgcgtattttaaggtattgaac
gctattgatgtgctttcctatacccaggcgcaaaaagaggctatctaccgtcagttagat
caaacgacgcaacgttttaacgtgggtctggtcgccattaccgacgtgcaaaacgcccgt
gcgcaatatgataccgtactggcgaatgaagtgaccgcccgcaacaacctggataacgcg
gtagaagagctgcgccaggtaaccggcaattattacccggagctggcgtcgcttaacgtc
gagcattttaaaaccgacaaacccaaagctgttaatgcgctgctgaaggaagcggaaaac
cgtaacctgtcgctgttgcaggcgcgtttaagtcaggatctggcgcgcgaacaaatccgt
caggcgcaggatggccatctgccgacgctgaatttaacggcctcaaccggcatttctgat
acctcttatagcggttctaaaaccaactccgcccagtacgacgatagcaacatggggcag
aataaaatcggcctgaacttctccctgccgctgtatcaaggcgggatggttaactcgcag
gtaaaacaggcgcagtataacttcgtcggcgcaagcgaacagctggaaagcgcgcaccgt
agcgtggtgcagaccgtacgttcttcctttaacaatattaacgcctccatcagcagcatc
aacgcgtataaacaggcagtcgtttccgcgcaaagttctttggatgcaatggaagccggt
tactcggtcggtacacgtaccattgttgacgtactggatgccaccaccactctgtatgat
gccaagcagcaactggccaacgcgcgttatacctatttgattaatcagttaaatatcaaa
tatgcgctcggtacgctgaacgagcaggatctgctcgcgcttaacagtacgttgggtaaa
cctatcccgacgtcgccggaaagcgtagcgccggaaacgccagatcaggatgctgccgca
gacggttataatgcccatagcgccgcgccggcagtacagccgaccgccgctcgcgccaac
agcaataacggcaatccattccggcattga
DBGET
integrated database retrieval system
