Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_13450
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Entry
SN31241_13450 CDS
T02779
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn01501
beta-Lactam resistance
senn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SN31241_13450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SN31241_13450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senn02000
]
SN31241_13450
01504 Antimicrobial resistance genes [BR:
senn01504
]
SN31241_13450
Transporters [BR:
senn02000
]
Other transporters
Pores ion channels [TC:
1
]
SN31241_13450
Antimicrobial resistance genes [BR:
senn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SN31241_13450
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SN31241_13450
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SN31241_13450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AGS28318
LinkDB
All DBs
Position
complement(1383468..1384925)
Genome browser
AA seq
485 aa
AA seq
DB search
MKITFTGYRQTATLATLAFVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIG
WRDFFHDPLLQELIAIALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRT
PADLSVMDESEINRRYEAAGATTAWELDLWGRVRSLSDQALAAYMALDETYIAARMSLVS
EVASAWLTLRADRELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEIN
RAAYTRQLARDRNALELLLGQPLTPELSRRLNEAVTLTEVAIPTTLPGGLPSVLLVRRPD
IRAAEYRLRGANARIGAARAAFFPTISLTGTAGTASASLSGLFEPGSGSWRFLPQITLPL
FHGGALRADLDRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQ
IAYELAGLRFQEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWREYS
EKKQG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacttttacaggctatcggcagaccgccacgctggcgacgcttgctttcgtc
accacgcttgctggctgtacgatggcgccgaagcacgaacgccccgcatcgccgactgcg
atggtctatccctacgcaacgtcaaccgtttctggcgcgccggatgccgctgacattggc
tggcgtgatttcttccacgatccgcttctacaggaactgattgcgatcgcgttacgcaat
aatcgggatttacgcaaggcagggctcaatgttgaagccgcccgggcgttataccgcatt
cagcgcgcggagatgctgccgacgctcggcatcgccaccgccatggacgccagtcgcact
cccgccgatctcagcgtcatggacgagtctgagattaaccgacgctacgaggcggctggg
gcgacgacggcctgggaactggatctctgggggcgagtgcgaagccttagcgaccaggca
ttagccgcctatatggcgcttgatgagacgtacattgcggcgcgaatgagcctggtttcc
gaagtcgccagcgcctggctgacgctacgggctgaccgggagctgctgcgcttaaccgag
gatacgctggccgcgcaaaaaagttcatacacattgacgacccagcttgcccggacaggt
aacgccacacagctcgatctgcgtatggcggagatcgcgctgcgttctgccgaaatcaat
cgcgcggcgtatacgcgacagttggcgcgggatcgtaacgcgctggaattgctgttgggc
cagccgctcacgcctgaactgtcgcgtcgactaaacgaggcggtcacgcttacggaagtc
gcgatcccgaccacattgccaggcggattaccgtcagttctgctggtacgccgcccggat
attcgcgccgccgagtacaggctgcgtggcgcaaacgcccgaataggcgcagcgcgcgcc
gccttcttcccgaccatcagcctgacaggcacggcgggaacggccagcgcgtctcttagc
ggactctttgaaccgggatcgggaagctggcgttttctaccgcaaatcaccttgcctctc
tttcacggcggcgcattacgcgctgacctggatagggcgcatgtccaaaaacagattgaa
atcgccaggtatgaaaacgttattcagcaagcctttcgcgacgtggcggatggtctggcg
ggacagcgtacgctgaatgaccaggtgcaatcagaacaacgcgcggttgaagccagtcaa
atcgcctatgagctggccggactccgttttcaggaaggcgtcgatgactaccttacgctg
cttgatacccatcgtatgctttatggcgcacaacagcgcctggtacgcacacgtctcatg
caacagttaaatatcattaacctgtataaagcattaggcggcggttggcgggaatacagt
gagaaaaagcaaggttag
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