Prodigiosinella confusarubida ATCC 39006: CWC46_00305
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Entry
CWC46_00305 CDS
T05968
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq01501
beta-Lactam resistance
serq01503
Cationic antimicrobial peptide (CAMP) resistance
serq02020
Two-component system
serq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CWC46_00305
09132 Signal transduction
02020 Two-component system
CWC46_00305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC46_00305
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC46_00305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_00305
02044 Secretion system [BR:
serq02044
]
CWC46_00305
01504 Antimicrobial resistance genes [BR:
serq01504
]
CWC46_00305
Transporters [BR:
serq02000
]
Other transporters
Pores ion channels [TC:
1
]
CWC46_00305
Secretion system [BR:
serq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CWC46_00305
RTX toxin transporter
CWC46_00305
Multiple protein transporter
CWC46_00305
RaxAB-RaxC type I secretion system protein
CWC46_00305
Antimicrobial resistance genes [BR:
serq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CWC46_00305
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CWC46_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ntox25
Cor1
Motif
Other DBs
NCBI-ProteinID:
AUG98400
UniProt:
A0A2I5TDR7
LinkDB
All DBs
Position
69767..71170
Genome browser
AA seq
467 aa
AA seq
DB search
MKKLLSLLIGLSLSGFSVVSQAEDLLQVYQQARETNPDLRSSAATRDSAFEKINEARSSL
LPQLGLGADYTYTNGFRDRNDVNSNVKSASLQLTQTLFDMSKWRALTLQEKQAGISDVTY
QTAQQTLLLNTATAYFNVLSAIDSLSYYNAQKQSIYRELDQTTQRFNVGLVAITDVQNAR
AQYDSVLASEVSARNTLDNALESLRQITGQFYPQLSGLNISHFNTQKPEPVNVLLKKAEN
HNLTLLSARLNQDLSREQIRYAESGHLPTLDLTASTGLSNTKYSGSRATGSSYVDNNIGQ
NQIGLSFNLPLYSGGSTSSQVKQAQDNYVASSENLESSHRTVIQTVRSSYNNVSASISSI
NAYKQSVISAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYNYLINQLNIK
DALGTLNENDLRILNATLGKPVSTTPVFVDNKPIVAISPTAASKSRP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctctctcttcttatcggtctgagcctaagcggctttagcgttgtaagc
caggcggaagatctattacaagtttaccagcaagctagagaaaccaaccctgacttgcgc
agttcagcggcgacccgtgattccgcctttgagaaaatcaatgaagcgcgttcttcattg
ctacctcagttgggcttaggtgcggattatacttacaccaacggtttccgtgatcgtaat
gacgttaacagtaatgttaagagtgcttcattgcagttaactcaaacactgtttgatatg
tcaaaatggcgggcattaaccctacaggaaaagcaggctggtatctcagatgtaacttat
caaactgcccagcagactctgcttctcaataccgcgacggcctattttaacgtgctgagc
gccattgactcgctgtcttactataatgcgcaaaaacagtccatttatcgtgaactggat
cagaccacgcaacgtttcaatgtgggattggttgccattaccgacgttcagaatgctcgg
gcgcaatatgacagcgtgctggcaagcgaagtttccgcacgtaatacattggataatgcg
cttgaaagtctgcgtcagattactggccaattctatccgcaactatctggtctgaatatc
agccattttaatactcagaaacctgaaccggttaatgttctgttgaaaaaagccgaaaat
cacaaccttaccttgctctctgcccgtctcaatcaggatctttcccgcgaacagattcgc
tacgcggaaagtggccatttaccaacacttgatctgactgcatctaccggattgagcaat
actaaatattctggttccagggccacaggcagcagttatgtcgacaacaatataggtcag
aaccaaataggcctgagcttcaatctgccgttatacagcggtggatcgacgagttctcaa
gttaagcaggcccaggataactatgtagccagcagtgaaaatctggaaagttctcatcgc
actgttattcagacagtacgttcttcctataacaacgtttctgcgtccatcagcagtatc
aatgcctacaagcagtctgtgatttctgctcaaagttcactagatgcgatggaagctggt
tatcaggtagggacgcgtaccattgtcgatgtattggatgccacgaccacgttgtataat
gccaaacagcagttatccagcgcgcgttataattatttgattaaccaactgaatattaaa
gacgcgttagggaccctgaacgaaaacgacctgcgaatactaaacgcgacactggggaaa
ccggtgtccacaacgccagtattcgttgataacaagcccattgttgccatttcaccgaca
gcagccagtaaatcccgcccgtaa
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