Salvelinus fontinalis (brook trout): 129838176
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Entry
129838176 CDS
T11136
Name
(RefSeq) complement C1r-A subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129838176
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129838176
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129838176
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
129838176
Peptidases and inhibitors [BR:
sfon01002
]
Serine peptidases
Family S1: chymotrypsin family
129838176
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Phagocytosis
Opsonins
129838176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
EGF_3
EGF
CDCP1_CUB_6
DUF4215
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
129838176
NCBI-ProteinID:
XP_055760929
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All DBs
Position
38:complement(9680581..9688798)
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AA seq
707 aa
AA seq
DB search
MDWTPPFIWLLCVSVCECWRLARSLPALHGVVQSPQFPQPYPAALSQQWDLSVPEGYQLQ
LSFTHLDIEPSADCYYDSLTVLYDKKVLAKFCGQENSADGHHPGNRPLLSPGNRLTLVLQ
TDDTNPEPHQHLGFSAHYQAKDIDECSAPDPEDGSGPLCSQLCHNTLGSYMCSCRHGYEL
RPDQRTCVLSCGGGIFDEPEGTLSSPGYPDPSPHGLACQYVISVEPGFIVTLNFTDSFHI
EHIGTQNGPSCLYHWLQVSIPDKEPQKLCGVKSPGLMATNSYTVQLDYHTDWAGLSQGWS
LHYTTQRVQCASPSSITNGRVTPNFPQYYYRDYIQVRCDPGFKLMMDGREIKSYASMCQK
NGQWHLSLPECHIIDCGEPKALLNGGLRFISGSQNQHLSVIQYHCNEPFYSLLGGATVSY
TCAADRTWRDNLDTPVIPSCIPVCGQPTESISGFQRIMGGDKAPDKTIPWQVMLSVDGGR
AGAMVIGDRWIMTAAHNLVHQGKLVLKEKLRVFLGDNDAEKLAKLTPLGVASLHPHPEYK
NPDKASYNHDIALIKLQQPLTFHAAIMPLCLPPENAAYKSGQIGMVSGFGIKEDDVIAND
LRYILLPVVDGDACQGSVNRTKSAMPTETIPVLTDNMFCAGVPEGGKDSCMGDSGGAYVL
RDGSTKRFWAAGIVSWGVGCGQTGRYGVYTRVAKYISWINKTMEDNK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggactggacccctccgttcatctggctgctgtgtgtgtctgtgtgtgagtgttggcgg
ttggcccggtccctgccagccctacatggggttgtccagtccccccagttccctcagccg
taccctgctgccctgtcacaacagtgggacctcagtgtacctgagggctaccagctccag
ctcagcttcactcatctggacatcgagccgtcagccgactgctactacgactcactcacg
gttttatatgacaagaaggtccttgcaaagttctgtggtcaggagaattctgctgatgga
catcacccaggcaaccggccactcttgtctccaggcaacaggctcaccctggtccttcag
acagacgacacgaaccctgagccacaccagcacctcggcttctctgcccattatcaggcc
aaagacatagatgagtgttcagctccagaccctgaggatggttctggtccactctgctcc
cagctctgccacaacaccctgggctcctacatgtgctcctgtcgccatggctacgagctc
cgccctgaccagcgcacctgtgtcttgtcctgtggtgggggtatatttgatgaaccagag
gggactctgtccagcccagggtaccctgacccatcaccccacggcctggcctgtcagtat
gtcatctctgtggagcctgggttcatcgtcaccctcaacttcactgacagcttccacata
gagcacataggcacccagaatggacccagctgcctctaccactggttacaggtgtccatc
cccgacaaggaaccccagaagctgtgtggagtgaagagtcctggactaatggccactaac
tcttacactgtccagctagactaccacactgactgggctggtctgagccagggctggagc
ctgcactacactactcagagggtgcagtgtgcttcacccagttctatcaccaatggaaga
gtcaccccaaactttccccagtactattacagagactacatccaagtccgctgtgaccct
ggcttcaaactaatgatggatggcagagagatcaagagctatgcctccatgtgtcaaaag
aatggacagtggcacctctccctccctgagtgccacataattgactgtggggaacctaaa
gcattgttgaatggaggcctaaggttcatatctggctctcagaaccagcatctctccgtc
attcagtaccactgcaatgaacctttctactcactccttggaggagcaactgtgagctac
acttgtgcagcagatagaacatggagagacaaccttgacacccctgtcattccctcatgt
atcccagtctgtggtcagcccacagagtccatctcaggctttcagaggatcatgggggga
gacaaagccccagacaaaaccatcccctggcaggtgatgctcagtgtggacggaggcaga
gcaggggccatggtgatcggggaccgctggatcatgactgcagctcataacctggtgcat
cagggcaaacttgtgctaaaggagaaacttcgggtttttttgggagacaatgatgcagaa
aaactagcaaagctcactcctcttggtgtcgcctctctccacccccaccctgaatacaaa
aacccagacaaagcaagctacaatcatgacatcgccctgataaaactccaacaaccactc
acattccacgctgccatcatgccattgtgtctgccaccagagaacgctgcatacaaaagt
ggccagattggtatggtgtcaggctttggcatcaaagaagatgatgtcattgccaacgat
ctcaggtacatacttctaccagtagtggacggggatgcgtgccaaggctctgtcaacaga
acaaaatcagcaatgccaacagagacgatccctgttctgacagacaacatgttctgtgcc
ggagtacctgaggggggcaaggactcctgtatgggggacagtggaggggcgtacgtcttg
agggatggtagtactaaacggttttgggctgcaggtattgtcagttggggtgtgggttgt
gggcagactggtagatatggagtgtacacccgtgtggctaaatacattagctggattaac
aaaaccatggaggacaataagtaa
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