Sorex fumeus (smoky shrew): 130024322
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Entry
130024322 CDS
T10594
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03320
PPAR signaling pathway
sfum04657
IL-17 signaling pathway
sfum04926
Relaxin signaling pathway
sfum05171
Coronavirus disease - COVID-19
sfum05200
Pathways in cancer
sfum05219
Bladder cancer
sfum05323
Rheumatoid arthritis
sfum05417
Lipid and atherosclerosis
Brite
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
130024322 (MMP1)
Peptidases and inhibitors [BR:
sfum01002
]
Metallo peptidases
Family M10
130024322 (MMP1)
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SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130024322
NCBI-ProteinID:
XP_055971014
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Position
Unknown
AA seq
465 aa
AA seq
DB search
MHSLVLLLLLYTTGAWAFPVTLADTEEEDMEIVQKYLENYYILKNDGEQIERQRNRGPVT
EKLKEMQKFFGLKVTGKWDAETLRIMKQPRCGVPDVASYQLTPGTSGWKHTHLTYRIENY
TPDMPRADVDHAIEKAFELWSKVSPLTFTKVFQDPADIILSFVWGDHRDNSPFYGPDGDL
AHAFGPGPGLGGDVHFDEEETWTNNFKNYNLYRVAAHELGHSLGLSHSTDIGALMYPTYI
FSGNVQLSQDDINGIQALYGPSKNPNQPTGPQTPKPCDSKLTFDAITTIRGEIMFFKDRF
YMRKSDYYPEVELNFISTFWPSLPSGLQAAYEVAHRDEIRFFKGNKYWAAQGQEMLYGYP
KDIYRAFGFPITVKNIDAAVSDEETGKTYFFVADKYWRYDEYKQSMDRGYPKMIQDDFPG
IGGKVDAVFNRKGFFYFFHGTRQYKFDPKTKRILSLQKSNSWFNC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctggtcctactgttgctgctctacaccacgggtgcctgggccttccctgtg
acactggcagacacggaagaggaagacatggagattgtccagaaatatctggaaaactat
tacatccttaagaatgatggggaacaaattgaaaggcagagaaacagaggtccagtgact
gaaaaactgaaagaaatgcagaaattttttgggctgaaagtgactgggaaatgggacgcc
gagaccctcaggataatgaagcagccgagatgtggggtgcccgatgtagcctcctatcag
ctcactcccgggacctcgggctggaagcacacacacctgacatacaggattgaaaattac
acacctgacatgccccgcgcagatgttgaccatgccattgagaaagcctttgaactctgg
agtaaagtctctcccctgaccttcaccaaggtctttcaggacccagcggacataatcctt
tcctttgtctggggagatcacagagacaactctcccttttatgggcctgatggagatctt
gcccatgctttcggaccaggaccaggactgggaggggatgttcattttgatgaagaggaa
acgtggaccaacaattttaaaaattacaacttgtatcgtgttgctgctcatgagctgggt
cattcccttggactttctcattctactgatatcggggctttgatgtatcccacttacatc
ttcagcggcaatgtgcagctctcccaagatgacatcaatggcatccaggccctatatgga
ccttctaaaaatcccaaccagccaacaggcccacaaaccccaaaaccgtgtgacagtaag
ctcacctttgatgccatcactacgattcggggagaaatcatgttcttcaaagaccggttc
tacatgcgcaaaagtgattactatccagaagtagagctcaatttcatttcaactttctgg
cccagtcttcccagtggacttcaagctgcttatgaagttgcacacagggatgaaatccga
tttttcaaaggtaacaagtactgggctgcccagggacaagaaatgctatatggatacccc
aaggacatctacagagcctttggcttcccaataaccgtgaagaatattgatgctgctgtt
tctgatgaagaaactgggaaaacgtacttttttgttgctgacaagtactggaggtatgat
gaatataagcaatctatggatagaggctatcccaaaatgatacaagatgactttcctggg
attggtggcaaagttgatgcagttttcaacagaaaaggtttcttctatttctttcatgga
acaaggcagtacaaatttgatcctaaaaccaagagaattttgagtctccagaaatcaaat
agctggttcaactgctga
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