Shigella flexneri 8401 (serotype 5b): SFV_3080
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Entry
SFV_3080 CDS
T00377
Symbol
tolC
Name
(GenBank) outer membrane channel precursor protein
KO
K12340
outer membrane protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv01501
beta-Lactam resistance
sfv01503
Cationic antimicrobial peptide (CAMP) resistance
sfv02020
Two-component system
sfv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SFV_3080 (tolC)
09132 Signal transduction
02020 Two-component system
SFV_3080 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SFV_3080 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
SFV_3080 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_3080 (tolC)
02044 Secretion system [BR:
sfv02044
]
SFV_3080 (tolC)
01504 Antimicrobial resistance genes [BR:
sfv01504
]
SFV_3080 (tolC)
Transporters [BR:
sfv02000
]
Other transporters
Pores ion channels [TC:
1
]
SFV_3080 (tolC)
Secretion system [BR:
sfv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SFV_3080 (tolC)
RTX toxin transporter
SFV_3080 (tolC)
Multiple protein transporter
SFV_3080 (tolC)
RaxAB-RaxC type I secretion system protein
SFV_3080 (tolC)
Antimicrobial resistance genes [BR:
sfv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SFV_3080 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SFV_3080 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LRR_NXF1-5
vRNAP_dom
Motif
Other DBs
NCBI-ProteinID:
ABF05143
UniProt:
Q0T0M2
LinkDB
All DBs
Position
3144993..3146474
Genome browser
AA seq
493 aa
AA seq
DB search
MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY
QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEK
RNLSLLQARLSQDLEREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN
MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI
SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL
NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSA
RTTTSNGHNPFRN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccattcttatcggcctgagcctttctgggttcagttcgttgagc
caggccgagaacctgatgcaagtttatcagcaagcacgccttagtaacccggaattgcgt
aagtctgccgccgatcgtgatgctgcctttgaaaaaattaatgaagcgcgcagtccatta
ctgccacagctaggtttaggtgcagattacacctatagcaacggctaccgcgacgcgaac
ggcatcaactcgaacgcgaccagtgcgtccctgcagttaactcaatccatttttgatatg
tcgaaatggcgtgcgttaacgctgcaggaaaaagcagcagggattcaggacgtcacatat
cagaccgatcagcaaaccttgatcctcaacaccgcgaccgcttatttcaacgtgttgaat
gctattgacgttctttcctatacacaggcacaaaaagaagcgatctaccgtcaattagat
caaaccacccaacgttttaacgtgggcctggtagcgatcaccgacgtgcagaacgcccgc
gcgcagtacgataccgtgctggcgaacgaagtgaccgcacgtaataaccttgataacgcg
gtagagcagctgcgccagatcaccggtaactactatccggaactggcggcgctgaatgtc
gaaaactttaaaaccgacaaaccacagccggttaacgcgctgctgaaagaagccgaaaaa
cgcaacctgtcgctgttacaggcacgcttgagccaggacctggagcgcgagcaaattcgc
caggcgcaggatggtcacttaccgactctggatttaacggcttctaccgggatttctgac
acctcttatagcggttcgaaaacccgtggtgccgctggtacccagtatgacgatagcaat
atgggccagaacaaagttggcctgagcttctcgctgccgatttatcagggcggaatggtt
aactcgcaggtgaaacaggcacagtacaactttgttggtgccagtgagcaactggaaagc
gcacatcgtagcgtcgtgcaaaccgtacgttcctccttcaacaacattaatgcttctatc
agtagtattaacgcctacaaacaagccgtagtttccgcgcaaagctcattagacgcgatg
gaagcgggctactcggtcggtacgcgtaccattgttgatgtgttggatgcgaccaccacg
ctgtacaacgccaagcaagagctggcgaatgcgcgttataactacctgattaatcagctg
aatattaagtcagccctgggtacgttgaacgagcaggatttgctggcactgaacaatgcg
ctgagcaaaccggtttccactaatccggaaaacgttgccccgcaaacgccggaacagaat
gctattgctgatggttatgcgcctgatagcccggcacccgtcgttcagcaaacatccgca
cgcactaccaccagtaacggtcataaccctttccgtaactga
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