Stenotrophomonas geniculata: RKE57_06870
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Entry
RKE57_06870 CDS
T09411
Symbol
emrC
Name
(GenBank) multidrug efflux transporter outer membrane subunit EmrC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen01501
beta-Lactam resistance
sgen02024
Quorum sensing
Module
sgen_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RKE57_06870 (emrC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RKE57_06870 (emrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_06870 (emrC)
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_06870 (emrC)
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_06870 (emrC)
Antimicrobial resistance genes [BR:
sgen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RKE57_06870 (emrC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RKE57_06870 (emrC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RKE57_06870 (emrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNF11856
LinkDB
All DBs
Position
1493459..1494952
Genome browser
AA seq
497 aa
AA seq
DB search
MNPIPHFTFRRSGRTLLVSALALALAACASSRGLNPQGHVLDVDSLHSERTLADTDLSAT
GFPAQDWWKALGDAQLDALVAEGLAGHPSLDAADARLRQAQAQVGTARADELPSLSVSGG
YTGLRLPESMVGSEMGGRYGGSSQVAFDFSYGVDLWGGKRAAWEAAVDGAHAATVEAQAA
RLNLSTGITQAYADLAYAWQLNDVAEEELARSQKSLELTRQRRSAGIDSDLQVRQAEARV
PAAQQQVQAAQQRIDAARTALAALVGKGPDRGLSIQRPQPLNPVALQLPGVLPSELLGRR
PDIVAARWRVEAADKQIKVAKTKFYPSFNLTALAGVVAPNVGDLLKSSSTFAYIGPALSL
PIFEGGKLRANLANTDAQYDLAVANYNQTVLDALRDVADQVNAVRSLAQQAHSQQQAVDT
ARSAFDLAQQRYRAGIGSYLDVLTAQSTLLQSQQQLAGLQSQQVQTSVRLSKALGGGFQP
ADADRAPIASHSDSSHS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgatcccgcatttcactttccgccggtccgggcgcacgctgctggtgtcagcg
ctggccctggccctggccgcctgtgccagcagtcgtggcctcaatccgcagggccacgtg
ctggatgtggacagcctgcacagcgaacgcaccctggccgacaccgacctgagcgccacc
ggcttcccggcgcaggactggtggaaggcgctgggcgatgcgcagctggacgcgctggtc
gccgagggcctggccggccacccgagcctggacgccgccgacgcgcgcctgcgccaggcc
caggcccaggtcggcactgcgcgtgccgacgaactgccgagcctgtcggtgtccggtggc
tacaccggcctgcgcctgcctgagtcgatggtcggcagcgagatgggcggccgctacggc
ggcagcagccaggtcgccttcgacttcagctacggcgtggacctgtggggcggcaagcgc
gctgcctgggaagctgccgtggatggcgcgcatgccgccaccgtcgaagcccaggccgca
cgcctgaacctgtccaccggcatcacccaggcttatgccgacctcgcctatgcgtggcag
ctcaatgatgtggccgaagaagaactggcccgctcgcagaaatcgctggagctgacccgc
cagcgccgcagcgccggcatcgacagcgacctgcaggtgcgccaggccgaggcccgggta
ccggccgcgcagcagcaggtgcaggccgcacagcagcgcatcgacgcggcccgcaccgca
ctggccgcgctggttggcaagggcccggaccgtggcctgtcgatccagcgcccgcagccg
ctgaacccggtggcgctgcagctgccgggcgtgctgcccagcgaactgctcggccgtcgc
cccgacatcgtcgccgcgcgctggcgcgtggaagcggccgacaagcagatcaaggtggca
aagaccaagttctacccgagcttcaacctgaccgcgctggccggcgtggtcgccccgaac
gtgggtgacctgctgaagagcagttccaccttcgcctacatcggcccggcgctgagcctg
ccgatcttcgaaggcggcaagctgcgcgccaacctggccaacaccgatgcgcagtacgac
ctggcggtggccaactacaaccagaccgtgctcgatgcgctgcgcgacgtggccgaccag
gtcaacgcggtgcgctcgctggcgcagcaggcgcattcgcagcagcaggccgtggacacc
gcacgctcggccttcgacctggcccagcagcgctaccgcgccggcatcggcagctacctg
gacgtgctgaccgcgcagtccacgctgttgcagtcgcagcagcagctggccggcctgcag
tcgcagcaggtgcagacctcggtgcgcctgagcaaggcgctgggcggtggtttccagccc
gctgacgccgaccgcgcaccgatcgcctcccattccgattcctcgcattcctga
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integrated database retrieval system
