Stenotrophomonas geniculata: RKE57_06945
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Entry
RKE57_06945 CDS
T09411
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen01501
beta-Lactam resistance
sgen02024
Quorum sensing
Module
sgen_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RKE57_06945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RKE57_06945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_06945
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_06945
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_06945
Antimicrobial resistance genes [BR:
sgen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RKE57_06945
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RKE57_06945
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RKE57_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNF11868
LinkDB
All DBs
Position
complement(1507400..1508839)
Genome browser
AA seq
479 aa
AA seq
DB search
MKMMTRLPFPAPSRLLLVGAVLLDLSGCASVGRYPVQAPDVAASYGRGDATLNAPADDPR
SSLDTPGRDIRQDTWWTGFGDERLDRLVAQALAANSDLAAAGLAVQRSRLQAGLASNALW
PQPSSSGVSGSASRATDQADDWRRSYSTGVSLGWEVDLWGRLRTQRDIARWEAEASEEDR
QNTALLVIGDTITQYWNLAYLNQSIATGQANLERLERTRELVQARFDAGAVSRLEVRQAL
QNLQSQRSAQSALEQQRVEVRNALTVLLDGTPWPQQDEPQDLLAARSPGINEGLPTDLLG
RRPDLRAAELRLRNSLKTIKVTATHYYPALSLTGSLGSSATSLGDVLRNPVATLGAGLSL
PFLNLQRAQLDTDIAGTGYQIAATNFRKTLYTALSEVDNALSAREQLARQVAASQASYDE
AVEVERAQEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQGQLNNDVTLFKALGGSAG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgacccgactgcccttccctgctccctcgcgcctgctgctggtgggcgct
gttctgctcgacctctcaggctgtgcgtcggtgggccgctacccggtgcaggcccccgac
gtggcggccagctacgggcgtggcgatgccaccctcaacgcaccggccgacgacccgcgc
agcagcctggatacacccggccgcgacatccgccaggacacctggtggaccggcttcggc
gatgaacgactggaccgtctggtggcgcaggcgctggccgccaacagcgatctggccgcc
gccggtctggccgtgcagcgttcgcgcctgcaggctggcctggccagcaacgcgctgtgg
ccgcagccttcgtcttccggggtcagtggcagcgccagccgcgccaccgaccaggctgat
gactggcgtcgcagctattccaccggcgtttcgctgggctgggaggtcgatctgtggggc
cgcctgcgcacccagcgcgacatcgcccgctgggaagccgaggccagcgaggaagaccgg
cagaacaccgcgctgctggtgatcggcgacaccatcacccagtactggaacctggcctat
ctcaaccagtcgatcgccaccggccaggccaacctggagcggctggaacgtacccgcgaa
ctggtccaggcccgcttcgacgccggtgcggtatcgcgcctggaagtacgccaggcactg
cagaacctgcagtcgcaacgttccgcacagagcgcgctggaacagcagcgggtggaagtg
cgcaatgcgctgaccgtgctgctggacggcacgccgtggccacagcaggacgaaccgcag
gacctgctggccgcacgcagccccgggatcaacgaaggcctgccgaccgacctgctcggc
cgccgtcccgacctgcgcgcagccgaactgcgcctgcgcaacagcctgaagaccatcaag
gtgaccgccacccactactacccggcgctgagcctgaccggcagcctcggctccagtgcg
acctcgctgggtgatgtgctgcgcaacccggtggccaccctgggtgcgggcctgtcattg
ccgttcctcaatctgcagcgcgcgcagctggataccgacatcgccggcaccggctaccag
atcgccgcgaccaatttccgcaagacgctgtacaccgcgctctcggaagtggacaacgca
ctgtcggcacgcgagcagctggcgcgccaggtggcggcctcgcaggcttcgtatgacgaa
gcggtggaagtggagcgcgcgcaggaagtgcgctaccgcgtgggtgccaccgacctgcgc
acctggctggaagcgcagcagacccggcgtgatgccgagctgtcgttggcgcgcgtgcgc
cagggccagctgaacaacgacgtgaccctgttcaaggcgctgggcggcagcgcgggctga
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