Scandinavium goeteborgense: A8O29_003965
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Entry
A8O29_003965 CDS
T06630
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe01501
beta-Lactam resistance
sgoe01503
Cationic antimicrobial peptide (CAMP) resistance
sgoe02020
Two-component system
sgoe03070
Bacterial secretion system
Module
sgoe_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
A8O29_003965 (tolC)
09132 Signal transduction
02020 Two-component system
A8O29_003965 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A8O29_003965 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
A8O29_003965 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_003965 (tolC)
02044 Secretion system [BR:
sgoe02044
]
A8O29_003965 (tolC)
01504 Antimicrobial resistance genes [BR:
sgoe01504
]
A8O29_003965 (tolC)
Transporters [BR:
sgoe02000
]
Other transporters
Pores ion channels [TC:
1
]
A8O29_003965 (tolC)
Secretion system [BR:
sgoe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
A8O29_003965 (tolC)
RTX toxin transporter
A8O29_003965 (tolC)
Multiple protein transporter
A8O29_003965 (tolC)
RaxAB-RaxC type I secretion system protein
A8O29_003965 (tolC)
Antimicrobial resistance genes [BR:
sgoe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
A8O29_003965 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
A8O29_003965 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
vRNAP_dom
DisA-linker
Motif
Other DBs
NCBI-ProteinID:
QKN80490
LinkDB
All DBs
Position
complement(667507..668985)
Genome browser
AA seq
492 aa
AA seq
DB search
MKKLLPILIGLSLTGFSAVSHAENLLQVYQQARLSNPDLRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYTNGFRDNNGIDSNETSAALTLTQTIFDMSKWRALTLQEKSAGIQDVTY
QTDQQTLILNTATAYFNVLSAIDSLSFTEANKQAVYRQLDQTTQRFNVGLVAITDVQNAR
SQYDTVLANEVTARNNLDNAVEQLRQVTGNYYPELSSLNVSTLKMDKPQPVNALLKEAEG
RNLALLQARLSQDLAREQIRYAETGHMPTVGLTASTGVSDTSYDGSNATSSQYTDRNIGQ
NQIGLNFNLPLYSGGSVTSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNINASISSI
NAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYSYLINQLNVK
SALGTLNENDLLALNGTLGKAVSTSPEAVAPENAQQDANADGYNGASAAPAAQPAAQRTN
TTSSNSSNPFKN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccatccttatcggcttgagcctgacgggcttcagcgcagtgagc
catgcggaaaacctgttgcaggtttatcagcaggcacgtttgagcaacccagacctgcgt
aagtccgcggccgatcgtgatgctgcattcgaaaaaattaacgaagcacgcagcccatta
ctgccgcagctcggtttaggtgcagattatacctacaccaacggctttcgcgataacaac
ggtatcgactccaacgagaccagcgccgcgttaaccttaacgcagaccatttttgacatg
tcaaaatggcgcgcgctgacgctgcaagagaaaagcgccggtatccaggacgtcacctat
cagaccgaccagcaaacgctgatcctgaacaccgcgacggcctacttcaatgtactgagc
gcgatcgactcgctctccttcactgaagcgaacaaacaagcggtttaccgtcagttagac
cagacaacccagcgtttcaacgtgggcctggtggcgatcactgacgtgcaaaacgcccgt
tcacagtacgacaccgtgctggcgaacgaagtgaccgcgcgtaataacctcgacaacgcc
gttgaacagctgcgtcaggtcaccggtaactactatccggagctgtcttctctgaatgtc
agcaccttaaaaatggataagccacaaccggtgaatgcgctgctgaaagaagcagaaggc
cgcaacctcgcgttgctgcaggctcgtctgagccaggacctggcccgtgagcagattcgc
tatgcggaaactggtcacatgccaaccgttggcctgaccgcgtctaccggcgtgtctgac
actagctatgatggcagcaacgccaccagtagccagtataccgaccgtaatatcggtcag
aatcagattggcctgaacttcaatctgccgctgtacagcggtggctcggtgacctcgcag
gtgaaacaggcgcagtacaacttcgtcggtgccagcgagcagctcgaaagcgcacaccgt
aacgtggttcagaccgtgcgttcgtccttcaataacatcaatgcgtccatcagcagcatc
aacgcctacaaacaggccgttgtttcagcgcagagttctttagacgcaatggaagcaggc
taccaggtcggtacccgtaccatcgttgatgtgttggacgcgaccacgacgctgtataac
gcgaagcagcaactctccagcgcgcgttatagctacctgattaaccagctgaatgttaag
tcagctctcggtacgcttaacgagaacgatctgttggccctgaatggcaccctcggtaaa
gcggtttccacttccccggaagcggtagccccagagaatgcccagcaggacgctaacgct
gatggttacaatggcgcgagcgcggctccggctgcacagcctgccgcacagcgtacaaac
accaccagcagcaacagttctaacccgttcaaaaactga
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