KEGG   PATHWAY: sgs02010
Entry
sgs02010                    Pathway                                
Name
ABC transporters - Streptomyces griseochromogenes
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
sgs02010  ABC transporters
sgs02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptomyces griseochromogenes [GN:sgs]
Gene
AVL59_01765  [KO:K10543]
AVL59_02030  [KO:K02040]
AVL59_03740  [KO:K15555] [EC:7.6.2.14]
AVL59_03750  [KO:K15553]
AVL59_04915  [KO:K02000] [EC:7.6.2.9]
AVL59_04920  [KO:K02001]
AVL59_04925  [KO:K02002]
AVL59_05185  [KO:K07335]
AVL59_05190  [KO:K07335]
AVL59_05195  [KO:K23537]
AVL59_05200  [KO:K23535]
AVL59_05205  [KO:K23536]
AVL59_06315  [KO:K15580]
AVL59_06320  [KO:K15581]
AVL59_06325  [KO:K15582]
AVL59_06330  [KO:K15583]
AVL59_06335  [KO:K10823]
AVL59_09225  [KO:K02064]
AVL59_09230  [KO:K02063]
AVL59_09235  [KO:K02062] [EC:7.6.2.15]
AVL59_09275  [KO:K11069]
AVL59_09435  [KO:K11069]
AVL59_09440  [KO:K11072] [EC:7.6.2.11]
AVL59_09445  [KO:K11071]
AVL59_09450  [KO:K11070]
AVL59_09910  [KO:K10007]
AVL59_09915  [KO:K10006]
AVL59_09920  [KO:K10005]
AVL59_09925  [KO:K10008] [EC:7.4.2.1]
AVL59_10345  [KO:K15555] [EC:7.6.2.14]
AVL59_10350  [KO:K15554]
AVL59_10355  [KO:K15553]
AVL59_11420  [KO:K17329]
AVL59_11425  [KO:K17330]
AVL59_11430  [KO:K17331]
AVL59_11605  [KO:K10200]
AVL59_11610  [KO:K10201]
AVL59_11615  [KO:K10202]
AVL59_11630  [KO:K10543]
AVL59_11635  [KO:K10545] [EC:7.5.2.10]
AVL59_11640  [KO:K10544]
AVL59_11845  [KO:K05847] [EC:7.6.2.9]
AVL59_11850  [KO:K05846]
AVL59_11855  [KO:K05846]
AVL59_11880  [KO:K05845]
AVL59_12165  [KO:K15554]
AVL59_12170  [KO:K15555] [EC:7.6.2.14]
AVL59_12175  [KO:K15553]
AVL59_12805  [KO:K10232]
AVL59_12915  [KO:K02067]
AVL59_12920  [KO:K02067]
AVL59_12925  [KO:K02067]
AVL59_12930  [KO:K02067]
AVL59_12935  [KO:K02067]
AVL59_12940  [KO:K02067]
AVL59_12945  [KO:K02066]
AVL59_12950  [KO:K02066]
AVL59_12955  [KO:K02065]
AVL59_13545  [KO:K10008] [EC:7.4.2.1]
AVL59_13550  [KO:K10005]
AVL59_13555  [KO:K10006]
AVL59_13560  [KO:K10007]
AVL59_15120  [KO:K09692]
AVL59_15125  [KO:K09693] [EC:7.5.2.4]
AVL59_15850  [KO:K15553]
AVL59_15895  [KO:K13890]
AVL59_15900  [KO:K13891]
AVL59_15905  [KO:K13892]
AVL59_15910  [KO:K13889]
AVL59_16100  [KO:K17244]
AVL59_16105  [KO:K17245]
AVL59_16110  [KO:K17246]
AVL59_16145  [KO:K10439]
AVL59_16345  [KO:K17329]
AVL59_17205  [KO:K05846]
AVL59_17210  [KO:K05846]
AVL59_17215  [KO:K05845]
AVL59_17220  [KO:K05847] [EC:7.6.2.9]
AVL59_18800  [KO:K10543]
AVL59_19605  [KO:K11072] [EC:7.6.2.11]
AVL59_19610  [KO:K11070]
AVL59_19615  [KO:K11071]
AVL59_19620  [KO:K11069]
AVL59_23735  [KO:K10236]
AVL59_23740  [KO:K10237]
AVL59_23745  [KO:K10238]
AVL59_25755  [KO:K02002]
AVL59_25760  [KO:K02001]
AVL59_25765  [KO:K02000] [EC:7.6.2.9]
AVL59_30580  [KO:K10439]
AVL59_30585  [KO:K10440]
AVL59_30590  [KO:K10441] [EC:7.5.2.7]
AVL59_30825  [KO:K15554]
AVL59_30830  [KO:K15555] [EC:7.6.2.14]
AVL59_30835  [KO:K15553]
AVL59_33260  [KO:K02020]
AVL59_33265  [KO:K02018]
AVL59_33270  [KO:K02017] [EC:7.3.2.5]
AVL59_34305  [KO:K02073]
AVL59_34310  [KO:K02072]
AVL59_34315  [KO:K02071]
AVL59_34685  [KO:K02001 K02002]
AVL59_34690  [KO:K02000] [EC:7.6.2.9]
AVL59_35675  [KO:K23188]
AVL59_35680  [KO:K23187]
AVL59_35685  [KO:K23186]
AVL59_36295  [KO:K10227]
AVL59_36300  [KO:K10228]
AVL59_36305  [KO:K10229]
AVL59_36515  [KO:K10234]
AVL59_36520  [KO:K10233]
AVL59_36525  [KO:K10232]
AVL59_36535  [KO:K10236]
AVL59_36940  [KO:K01999]
AVL59_36945  [KO:K01997]
AVL59_36950  [KO:K01998]
AVL59_36955  [KO:K01995]
AVL59_36960  [KO:K01996]
AVL59_38170  [KO:K15772]
AVL59_38175  [KO:K15771]
AVL59_38180  [KO:K15770]
AVL59_38310  [KO:K18232]
AVL59_38315  [KO:K18233]
AVL59_38745  [KO:K16785]
AVL59_39165  [KO:K10546]
AVL59_39170  [KO:K10548] [EC:7.5.2.-]
AVL59_39175  [KO:K10547]
AVL59_39395  [KO:K18887]
AVL59_39400  [KO:K18888]
AVL59_39700  [KO:K09815]
AVL59_39705  [KO:K09817] [EC:7.2.2.20]
AVL59_39710  [KO:K09816]
AVL59_40620  [KO:K03523]
AVL59_40630  [KO:K15553]
AVL59_40635  [KO:K15554]
AVL59_40640  [KO:K15555] [EC:7.6.2.14]
AVL59_41365  [KO:K10441] [EC:7.5.2.7]
AVL59_41370  [KO:K10440 K10439]
AVL59_41380  [KO:K06726] [EC:5.4.99.62]
AVL59_41570  [KO:K25287]
AVL59_41670  [KO:K10240]
AVL59_41675  [KO:K10241]
AVL59_41680  [KO:K10242]
AVL59_41915  [KO:K11081]
AVL59_41920  [KO:K11082]
AVL59_41925  [KO:K11083]
AVL59_41930  [KO:K11084]
AVL59_42455  [KO:K17331]
AVL59_42460  [KO:K17330]
AVL59_42465  [KO:K17329]
AVL59_42580  [KO:K09811]
AVL59_42585  [KO:K09812]
AVL59_42620  [KO:K10232]
AVL59_42625  [KO:K10233]
AVL59_42630  [KO:K10234]
AVL59_42690  [KO:K09692]
AVL59_42695  [KO:K09693] [EC:7.5.2.4]
AVL59_43610  [KO:K02007]
AVL59_43615  [KO:K02008]
AVL59_43620  [KO:K02006]
AVL59_44505  [KO:K01999]
AVL59_45210  [KO:K10112] [EC:7.5.2.-]
AVL59_45610  [KO:K02036] [EC:7.3.2.1]
AVL59_45615  [KO:K02038]
AVL59_45620  [KO:K02037]
AVL59_45625  [KO:K02040]
AVL59_46955  [KO:K16014]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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