Sphingomonas hankookensis: PPZ50_10405
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Entry
PPZ50_10405 CDS
T08811
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
shan
Sphingomonas hankookensis
Pathway
shan01501
beta-Lactam resistance
shan01503
Cationic antimicrobial peptide (CAMP) resistance
shan02020
Two-component system
shan03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPZ50_10405
09132 Signal transduction
02020 Two-component system
PPZ50_10405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPZ50_10405
01503 Cationic antimicrobial peptide (CAMP) resistance
PPZ50_10405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shan02000
]
PPZ50_10405
02044 Secretion system [BR:
shan02044
]
PPZ50_10405
01504 Antimicrobial resistance genes [BR:
shan01504
]
PPZ50_10405
Transporters [BR:
shan02000
]
Other transporters
Pores ion channels [TC:
1
]
PPZ50_10405
Secretion system [BR:
shan02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PPZ50_10405
RTX toxin transporter
PPZ50_10405
Multiple protein transporter
PPZ50_10405
RaxAB-RaxC type I secretion system protein
PPZ50_10405
Antimicrobial resistance genes [BR:
shan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PPZ50_10405
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PPZ50_10405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WCP70794
LinkDB
All DBs
Position
2190316..2191887
Genome browser
AA seq
523 aa
AA seq
DB search
MRGGKFITGVAALALLAGPANAETLREALARAYATNPQLTGARANLRATDEGVPLARSQG
LPQVTTQSSVIENVITPASRGFTQAPRQGTVQVQVSQSLFAGGSVRNNVRAADARVDAGR
ANLRSTEANVFTLVVAAYNDVIRDEAIVRLNQQNVRVLEVNLQASKDRFQVGDLTRTDVA
QSEARLASAQAQLRNAEASLIRSRENYVATTGSPAATLDTPPVLPNLPVDPNAAVGVAVA
NNPALIAARRTSDAAGFDVSVARASRLPTISAVGGGGYTSFLGSAESVNGIVLQQDGGQA
QVGVQMSLPLWQSGRPSAQIRRAQALEGAAIEQVTQVERTVVSDARSAFAAWQSALRVIQ
SSEVQVAANRLSLEGVRAENSVGTRTILDILNAEQELLNSQVQLVSARRDAYVAGFALLA
AMGKAEARDLGLDGGALYDPTVNYSRVRNNIWDWSGDPAPVPIAPSTVNSPAQTPVVTRE
LDPSLQRSPNPYTPTQGIDAPNRQGGAPRATQGVDTPRANPDS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggggaagttcattaccggagtcgcggcgctggcgctgctggccgggccggcg
aatgcggaaacgctgcgcgaggcattggcgcgggcctatgccaccaacccgcagctgacc
ggcgcgcgggcgaacctgcgcgcgaccgacgagggcgtaccgctggcgcgctcgcagggc
ctgccgcaggtcacgacccagagctcggtgatcgagaacgtcatcaccccggcaagccgc
ggcttcacccaggccccacgccagggcaccgtgcaggtgcaggtatcgcagtcgctgttc
gccggcgggtcggtgcgcaacaatgtccgcgccgccgatgcgcgggtcgatgccggccgt
gccaacctgcgcagcaccgaggcgaatgtcttcacgctggtcgtcgccgcctataatgac
gtcatccgcgacgaagcgatcgtccggctgaaccagcagaatgtccgcgtgctggaagtg
aacctccaggcatcgaaggaccggttccaggtcggcgacctgacccgcaccgacgttgcg
cagtcggaggcacggctggcatcggcgcaggcgcagttgcgcaatgccgaagcgtcgctg
atccgcagccgcgaaaactatgtcgcgaccaccggttcgccggccgcgacgctcgacacg
ccgccggtgctccccaacctgccggtcgatcccaatgcggcggtcggggtggcggttgcg
aacaatcccgcgctgatcgccgcgcgtcgtaccagcgatgccgccgggttcgacgtcagc
gtggcgcgcgccagccggctgccgacgatcagcgcggtcggtggcggcggctataccagc
ttcctcggatcggctgagtcggtgaacggcatcgtgttgcagcaggacggcggtcaggcg
caggtcggcgtgcagatgagcctgccgctgtggcagagcggccgtccgagcgcccagatt
cgccgggcgcaggcgctggaaggcgccgcgatcgaacaggtgacgcaggtcgaacgtacc
gtcgtttccgacgcccgctcggccttcgccgcgtggcagtcggcgctgcgcgtgatccag
tcgtcggaagtgcaggtcgcggcgaaccgcctgtcgctggagggcgttcgcgccgagaac
agcgtgggcacgcgcacgatccttgacatcctgaacgccgaacaggaactgctcaattcg
caggtccagctggtgtcggcccggcgcgacgcctatgtcgcgggcttcgcgctgctggcg
gcgatgggcaaggccgaggcacgcgatctgggcctcgacggtggcgcgctctacgatccg
acggtcaattacagccgggtgcgcaacaatatctgggactggagcggcgatcccgcgccg
gtgccgatcgcgcccagcacggtgaacagcccggcgcagaccccggtcgtcacccgcgaa
ctcgatccgtcgctgcagcgcagccccaatccgtacaccccgacccagggcatcgatgcc
cccaatcggcagggcggcgccccgcgcgccacgcagggcgttgacacgccgcgcgccaac
cccgacagctaa
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