Shewanella sp. H8: ABIS04_09115
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Entry
ABIS04_09115 CDS
T10623
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sheh Shewanella sp. H8
Pathway
sheh01501
beta-Lactam resistance
sheh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABIS04_09115
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABIS04_09115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_09115
01504 Antimicrobial resistance genes [BR:
sheh01504
]
ABIS04_09115
Transporters [BR:
sheh02000
]
Other transporters
Pores ion channels [TC:
1
]
ABIS04_09115
Antimicrobial resistance genes [BR:
sheh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABIS04_09115
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
ABIS04_09115
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
ABIS04_09115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XBJ50273
LinkDB
All DBs
Position
2098162..2099559
Genome browser
AA seq
465 aa
AA seq
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MINQSFTLKLTSIALCLSLTSACSSLTHTDFTQPDVTIPDSWQSVSVNQQVKLDPWWQRF
NNPELNQLIEQVLLTNNDLALATLTLRRARLQAGLTDTQSYPQINANVNGAKTKPLEGGA
STSEYGTKLSLSYELDLWGRVSADMDAAKWTSLASEQDRESTAQSLVSTTAILYWQIGYL
KQSLTLSQNSIDYAQQTYDLAEQQYRSGAVSQLNVFEAKRSLAGQQASHSDLEQQLVEAQ
NALAILFNQPPAKMAININQLPDTVLPSIAEGIPADVLIRRPDVKSALYELKSAYSAKDA
TFAGYLPTLSLSGSLGTSSTELKELLQNPIGTLGANLLLPFVQWNEMQLYKELATVDVQS
AVVTYRQTLYNAFKEVDNAISARQHYQYQALKLSEQYQAATSAERIYASQYRNGAVSIQD
WLDAKETQRSAEVLLLANRYNLFSAQATLYQALGGSDIAAPLVTE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgataaaccaaagttttacactcaaactgactagcattgcattgtgcctatcgctcacc
agcgcctgcagtagcctgactcacactgattttacacaacccgacgtgacgatacctgat
agttggcaaagtgttagcgttaatcaacaagtcaaactcgatccttggtggcaacgtttt
aataatccagaactcaatcaactcatagagcaagtgctattaaccaataatgatttagcg
ctcgcaacgttaaccttacgtcgcgcaaggctgcaggctggcttaaccgatacacaaagc
tacccacaaattaatgctaacgtgaatggtgctaaaacaaagcctctagagggtggcgct
agcacaagcgaatatggcactaaattatcgctcagttacgaactggatttatggggccga
gtttctgccgatatggatgcagctaaatggactagtttagccagtgaacaagacagagaa
agcactgcacaaagtttagtgtccaccacggcaatattgtattggcaaattggatacctt
aaacaaagtcttacccttagccaaaatagtattgattatgcacaacaaacctatgatctt
gctgaacaacaataccgttcaggtgctgtgtcacaactgaatgtatttgaagcaaaacgc
agcttagcaggacaacaggcgagccatagtgaccttgagcagcaacttgttgaagcacaa
aatgcgctagctattttgtttaatcagccacccgctaaaatggccataaacattaatcag
ctgccagacactgtattacctagtattgcagaagggatccctgcagatgtgttaattcgc
aggcctgatgtgaaatcggcactgtatgaacttaaatcagcttattcagcaaaagatgcc
acgtttgctgggtatttacctacgttgtcactttctggctcgttagggacatcatcaacc
gagctgaaagaattattacaaaatccgattggtacgctgggagccaatttactattgcca
tttgtacaatggaacgaaatgcaactgtataaagagcttgccaccgttgatgtgcaatca
gctgttgtgacatataggcaaacgttatacaacgcctttaaagaagtcgataacgcgatt
tctgcacggcaacattaccaatatcaagcattaaaactctctgaacaatatcaagcggca
acgtctgcggagcgcatatacgccagccagtatcgtaatggtgcagtaagtattcaagat
tggttagacgctaaagaaactcaacgcagtgctgaagtgttattgctggcgaatcgttat
aacctatttagtgcacaagctacgttgtatcaagctcttggcggcagcgatattgcagcg
ccacttgtaacggaataa
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