Shewanella sp. LZH-2: JM642_02925
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Entry
JM642_02925 CDS
T10525
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel01501
beta-Lactam resistance
shel01503
Cationic antimicrobial peptide (CAMP) resistance
shel02020
Two-component system
shel03070
Bacterial secretion system
Brite
Transporters [BR:
shel02000
]
Other transporters
Pores ion channels [TC:
1
]
JM642_02925
Secretion system [BR:
shel02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JM642_02925
RTX toxin transporter
JM642_02925
Multiple protein transporter
JM642_02925
RaxAB-RaxC type I secretion system protein
JM642_02925
Antimicrobial resistance genes [BR:
shel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JM642_02925
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JM642_02925
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRK80084
LinkDB
All DBs
Position
633310..634728
Genome browser
AA seq
472 aa
AA seq
DB search
MKLSRLAWLCLLPLPSLLPLAAYAQPSSFTEAWQQVLKVSDKLQAQSQEVNRAKGEQEAG
ESLNLPSLSLNGSYTHLEKPIELDLRDLNPLASGSLPLPPELGGILASIPGSLFVTPFTE
QDIFRASLQAMWPIYTGGQITAAQGIHAAMVAEKQQELQLATRDLFTQLVDRYYAVDVTQ
SLVSTQTDLVASLTKHVDHALALEREGQIAKVERLNAQVALDNAKVNLGSARRQHEMAVI
ALSRMLQRSDVSTNSPLFVLPQAPSLGDLTQMTLNQHPALKLLEAKEAQANGLVSLEKGK
YHPTVFLFGNYTLYEDDSLFSKVEPDWMVGVGVKVPLLSRDGRSGKVEAAKSALLQARYT
KAQTRQDLSLLLDQSYRQLLQAEEEFKALNTSLELATENLRLREIAFNQGLSTSIDRVDA
ELKLSAVKTQQLGASYRYVQAYARLMAISGQLDEFIGRSATGTQSQETINAR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatcacgtttggcatggctgtgtttattgcctttgccctcactattgccgtta
gcggcctatgcccagcccagtagctttactgaggcttggcagcaagtgcttaaggtgagc
gataaactccaggctcaatcccaagaggtgaatcgcgccaagggcgagcaagaggcgggc
gaaagtttaaatctgccgtccctcagtctgaatggcagttatacccacctcgaaaaacca
attgaattagatttaagggatcttaatcccctagcctcgggttcattgccattacctcct
gaattaggtggcatattggcgagtattccaggttcattatttgtcacgccctttaccgag
caagatattttccgcgccagcttacaggcgatgtggccgatttataccggcggccagatc
actgcggctcaaggcattcatgccgccatggtggccgagaaacaacaggaattacagtta
gcaacccgcgacttattcactcagttagttgatcgttattatgccgttgatgtgactcaa
tccctcgtcagcacccaaaccgatctggtggcctccttaactaagcacgttgaccatgcg
ctggcgctggagcgcgaggggcaaatcgctaaggtcgagcgcctgaatgctcaagtggcc
ttagacaacgctaaggtcaatttaggcagcgcccgccgccagcatgaaatggccgttatc
gccctatcgcgtatgttgcaaaggagtgatgtcagcactaactcgccactgtttgtgtta
ccgcaggcgccgtcattgggggacttgacccaaatgaccttaaatcaacacccagcgctt
aagctacttgaggctaaagaggcgcaggcgaatggtttggtttccttagagaaaggtaaa
tatcacccgactgtgtttctctttggtaattacaccttatacgaagatgacagcttgttt
tctaaggtagaaccggactggatggtcggtgtcggtgtaaaagtgcccttgctgagccgc
gatggccgcagcggtaaagtggaagcggctaagagtgccttgctgcaagcccgttacact
aaggcgcagacacgccaagacttaagtttgctgctcgaccaaagttaccgccagttatta
caggccgaagaagagttcaaggccctgaatacctcactcgaactggccaccgagaacctg
cgtttaagggaaatcgcctttaatcaagggctttcaacctctattgatagggtcgatgcc
gaattaaaactgagcgccgttaaaacccagcagctcggtgccagttatcgctatgtgcaa
gcctatgccagattaatggccatcagtggtcaattagatgaatttatcggtcgcagtgcc
acaggcactcaatcgcaggagactatcaatgcgcgctaa
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