Shewanella sp. MTB7: HWQ47_24805
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Entry
HWQ47_24805 CDS
T10730
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
shem Shewanella sp. MTB7
Pathway
shem01501
beta-Lactam resistance
shem01503
Cationic antimicrobial peptide (CAMP) resistance
shem02020
Two-component system
shem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HWQ47_24805
09132 Signal transduction
02020 Two-component system
HWQ47_24805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HWQ47_24805
01503 Cationic antimicrobial peptide (CAMP) resistance
HWQ47_24805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_24805
02044 Secretion system [BR:
shem02044
]
HWQ47_24805
01504 Antimicrobial resistance genes [BR:
shem01504
]
HWQ47_24805
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_24805
Secretion system [BR:
shem02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HWQ47_24805
RTX toxin transporter
HWQ47_24805
Multiple protein transporter
HWQ47_24805
RaxAB-RaxC type I secretion system protein
HWQ47_24805
Antimicrobial resistance genes [BR:
shem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HWQ47_24805
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HWQ47_24805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WBJ95011
LinkDB
All DBs
Position
complement(5680578..5681957)
Genome browser
AA seq
459 aa
AA seq
DB search
MKITRFVCLSLILVSGTSLAQPMTFTTAWQQLLTVSDKLQAESQEVLRAQAEQEAGEDLG
MPSLDINGSYTHLQKPIELDLQDLNPLASLDPGSLPPALGGALASIPSSMFVTPFTEQDI
FRASLQAMWPIYTGGKITAAQGIHAAQVVEKEQQLQLVTRDLFTLLVDRYYAVSVTEKLM
QTQQQLVASLSEHVDHALKLEEQGQIAKVERLNAQVALENARVSAGSAKRQHEMAMIALS
RMLHQRSVTPASQLFMLTNQPSLPRLSQLTMTQHPALRLLEAKEDQASGLIEVEEGRYKP
TVFLYGNYTLYEDDSLFSKVEPDWMVGLGVKVPLLSRDGRSGKVQAAKSALLQARYTKAQ
TQQDLSLLLDQSYRQLQQAQEEAVALNTSLSLAEENLRLREMAFNQGLSTSIDRVDAELK
LSAVKMQQLGAKYRYVQSYARLMSISGQLDDFIGRTNRL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacccggttcgtttgcttgtctctgatcttagtatcaggtacttctctggct
caaccgatgacgtttaccactgcgtggcagcagttattgaccgtgagcgataagcttcag
gccgaatctcaagaagtgttgcgggctcaagctgagcaggaagcaggtgaagatcttggc
atgccttctcttgatatcaatggtagttatactcatctccaaaaaccgatcgagctggat
cttcaggatctcaatccgttagcttcgctcgatcctggcagcttacccccagctctgggc
ggtgcattggccagtattccaagttcaatgtttgtcaccccctttaccgaacaagatatt
ttccgtgcaagtctacaagccatgtggcccatctatactggtggcaagatcaccgcagct
caagggatccatgctgcccaagtggtggagaaagaacagcagttgcaactcgtcacccga
gatctgtttactctgttagtcgacagatattacgccgtgtcagtgacagagaagttaatg
cagacgcagcagcaattagttgcctctttatctgaacatgtggatcatgcccttaaattg
gaagaacaaggtcagatcgctaaggttgaaaggctcaatgcgcaagtcgcgctagagaat
gctcgagtgagtgctggcagtgctaagcgtcaacatgagatggcgatgatcgcgttatct
cgtatgttacatcaacgcagtgtgactccagcatctcagttattcatgctgacaaatcag
ccctcgctaccacgcttgagtcagttaaccatgactcagcatccggcattaagattactc
gaagctaaagaagatcaagcgagtggtttgatcgaggtcgaagaaggacgttataaaccc
accgtttttctctacggtaattacaccttgtatgaagatgacagcctgttctctaaggtt
gagccagattggatggtaggtttaggtgttaaggtgcctctactaagccgagacggacgc
agtggtaaagtgcaagcggcgaaaagtgcgctgctacaagctagatatactaaggcgcaa
actcagcaagacttaagtctgttacttgatcaaagttaccgtcaactgcaacaggcgcaa
gaggaagccgtagcgcttaatacgtcattgagtctggctgaagaaaatctacgtctgcgt
gaaatggcttttaatcaaggtttgtcgacttcaatagatagagtcgatgccgaactgaag
cttagcgccgtaaaaatgcagcaactcggtgccaaataccgttatgttcagtcctatgca
cgtttgatgagtatcagcggacaattggatgattttatcggtcgtacgaacaggttataa
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