Shewanella sp. FDAARGOS_354: CEQ32_19270
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Entry
CEQ32_19270 CDS
T04944
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf01501
beta-Lactam resistance
shf01503
Cationic antimicrobial peptide (CAMP) resistance
shf02020
Two-component system
shf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CEQ32_19270
09132 Signal transduction
02020 Two-component system
CEQ32_19270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CEQ32_19270
01503 Cationic antimicrobial peptide (CAMP) resistance
CEQ32_19270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_19270
02044 Secretion system [BR:
shf02044
]
CEQ32_19270
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_19270
Transporters [BR:
shf02000
]
Other transporters
Pores ion channels [TC:
1
]
CEQ32_19270
Secretion system [BR:
shf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CEQ32_19270
RTX toxin transporter
CEQ32_19270
Multiple protein transporter
CEQ32_19270
RaxAB-RaxC type I secretion system protein
CEQ32_19270
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CEQ32_19270
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CEQ32_19270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ASF16929
LinkDB
All DBs
Position
4279487..4280905
Genome browser
AA seq
472 aa
AA seq
DB search
MKLSRLAWLCLLPLPSLLPLAASAQPSSFTEAWQQVLKVSDKLQAQSQEVNRAKGEQEAG
ESLNLPSLSLNGSYTHLEKPIELDLRDLNPLASGSLPLPPELGGILASIPGSLFVTPFTE
QDIFRASLQAMWPIYTGGQITAAQGIHAAMVAEKQQELQLATRDLFTQLVDRYYAVDVTQ
SLVSTQTELVASLTKHVDHALALEREGQIAKVERLNAQVALDNAKVNLGSARRQHEMAVI
ALSRMLQRSDVSTNSPLFVLPQAPSLGDLTQMTLNQHPALKLLEAKEAQANGLVSLEKGK
YHPTVFLFGNYTLYEDDSLFSKVEPDWMVGVGVKVPLLSRDGRSGKVEAAKSALLQARYT
KAQTRQDLSLLLDQSYRQLLQAEEEFKALNTSLELATENLRLREIAFNQGLSTSIDRVDA
ELKLSAVKTQQLGASYRYVQAYARLMAISGQLDEFIGRSATGTQSQETINAR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatcacgtttggcatggctgtgtttattgcctttgccctcgctattgccgtta
gcggctagtgcccagcccagcagctttactgaggcttggcagcaagtgcttaaggtgagc
gataaactccaggctcaatcccaagaggtgaatcgcgccaagggcgagcaagaggcgggc
gaaagtttaaatctgccgtccctcagtctgaatggcagttatacccacctcgaaaaacca
attgaattagatttaagggatctcaatcccctagcctcgggttcattgccattacctcct
gaattaggtggcatattggcgagtattccgggttcattatttgtcacgccctttaccgag
caagatatttttcgcgccagcttacaggcgatgtggccgatttataccggcggccagatc
actgcggctcaaggcattcatgccgccatggtggccgagaaacaacaggaattacagtta
gcaacccgcgacttattcactcagttggttgatcgttattatgccgtcgatgtgactcaa
tccctcgtcagcacccaaaccgagctggtggcctccttaactaagcacgttgaccatgcg
ctggcgctggagcgcgaagggcaaatcgctaaggtcgagcgcctcaatgctcaagttgcc
ttagacaacgctaaggtcaatttaggcagcgcccgccgccaacatgaaatggccgttatc
gccctatcgcgtatgttgcaacgaagtgatgtcagtactaactcgccgctatttgtgctg
ccacaggcgccgtcattgggggacttgacccaaatgaccttaaatcaacacccggcgctt
aagctacttgaggctaaagaggcgcaggcgaatggtttggtttccttagagaaaggtaaa
tatcacccgactgtgtttctctttggtaattacaccttatacgaagatgacagcttgttt
tctaaggtagaaccggactggatggtcggtgtcggtgtaaaagtgcccttgctgagccgc
gatggccgcagcggtaaagtggaagcggctaagagtgccttgctgcaagcccgttacact
aaggcgcagacccgccaagacttaagtttgctgctcgaccaaagttaccgccagttatta
caggccgaagaagagttcaaggccctgaatacctcactcgaactagccactgagaacctg
cgtttaagggaaatcgcctttaatcaagggctttcaacgtctatcgatagggtcgatgcc
gaattaaaactgagcgccgttaaaacccagcagctcggtgccagttatcgctatgtgcaa
gcctatgccagattaatggccatcagtggtcaattagatgaatttattggtcgcagtgcc
acaggcactcaatcgcaggagactatcaatgcgcgctaa
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