Shinella sp. XGS7: LHJ69_00675
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Entry
LHJ69_00675 CDS
T10581
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
shin Shinella sp. XGS7
Pathway
shin01501
beta-Lactam resistance
shin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHJ69_00675
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHJ69_00675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_00675
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_00675
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_00675
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHJ69_00675
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LHJ69_00675
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LHJ69_00675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CsoSCA_N
Motif
Other DBs
NCBI-ProteinID:
UDF35647
LinkDB
All DBs
Position
complement(154941..156362)
Genome browser
AA seq
473 aa
AA seq
DB search
MNKSYKTFSSLSALAAALLLAGCANLAPEYQRPAAPVAGDWPSAAKPAEAAQAPKAAELP
WQQFYAGDARVRALIELALQNNRDLRVALLNVDKARAQYRISDAARWPTVSAGLSGQRSP
ASNGSGTINGVYQAGLQVTAYELDLFGKLKNNSESALASYLATAEGQRAARLSLVAGVAA
AQLNLQAAEELLTLSRQTLATREDSLKLSRTKFDVGAASQLDLSSAESAAGAARASLAAA
QRARDEAENALVLLVGQPLPVSLPAAQPLQALQLPRVPAGLPSEVLVSRPDVLQAEQQLR
AANANIGAARAAVFPSITLTASAGTASTQLSDLFRNSAWSFASQILMPIFDAGRNQANIE
VAKANQGIALAQYEKTVQTAFREVADALAGLATLDEQLGGQELQARAEAQRLALVELRFG
NGVSNSLELLDAQRASYAAQQALLQVRLAKALNRVQLYKVLGGGAADEAKPAS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagctacaagaccttctcctccctgagcgccctggccgcggccctgctgctg
gccggctgcgccaacctcgcgcccgagtaccagcgtcccgccgccccggtggcgggcgac
tggcccagcgccgccaagccggccgaggccgcccaggcgcccaaggccgccgagctgccc
tggcagcagttctatgccggcgacgcccgcgtgcgcgccctgatcgagctggccctgcag
aacaaccgcgatctgcgcgtggccctgctgaatgtggacaaggcgcgcgcccagtaccgc
atcagcgatgccgcgcgctggcccacggtcagcgccggcctgtccggtcagcgctcgccc
gccagcaacggcagcggcacgatcaacggcgtctaccaggccggtctgcaggtcacggcc
tatgagctggatctcttcggcaagctgaagaacaacagcgagtcggcgctggccagctac
ctggccacggccgagggccagcgcgccgcccgcctgagcctggtggccggcgtggccgcg
gcccagctgaatctgcaggccgccgaagaactgctgacgctcagccgccagaccctggcc
acgcgcgaggacagcctcaagctcagccgcaccaagttcgatgtgggcgcggcctcgcag
ctggatctctccagcgccgagtccgcggccggcgcggcccgggccagcctggctgccgcc
cagcgtgcgcgcgacgaggccgagaacgccctggtgctgctggtgggtcagcccctgcca
gtcagcctgccggcagcccagccgctgcaggccctgcagctgccgcgcgtgccggcgggc
ctgccctccgaggtgctggtcagccgtcccgatgtgctgcaggccgagcagcagctgcgt
gccgccaatgccaatatcggcgcggcgcgtgcggcggtcttccccagcatcacgctcacc
gccagtgccggcacggccagcacccagctctcggacctgttccgcaacagcgcctggagc
tttgcctcgcagatcctgatgcccatcttcgatgccggccgcaaccaggccaatatcgag
gtggccaaggccaatcagggcatcgccctggcgcagtacgagaagacggtgcagaccgcc
ttccgcgaggtggccgatgccctggccggcctggccacgctggacgagcagcttggcggc
caggagctgcaggcccgcgccgaggcccagcgcctggccctggtggagctgcgcttcggc
aacggtgtgtccaactccctggagctgctggatgcccagcgcgccagctatgcggcccag
caggccctgctgcaggtgcgcctggccaaggccctgaaccgcgtgcagctctacaaggtg
ctgggcggcggtgcggccgacgaggccaagccggcctcctga
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