Shinella sp. XGS7: LHJ69_18605
Help
Entry
LHJ69_18605 CDS
T10581
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
shin Shinella sp. XGS7
Pathway
shin01501
beta-Lactam resistance
shin01503
Cationic antimicrobial peptide (CAMP) resistance
shin02020
Two-component system
shin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LHJ69_18605
09132 Signal transduction
02020 Two-component system
LHJ69_18605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHJ69_18605
01503 Cationic antimicrobial peptide (CAMP) resistance
LHJ69_18605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_18605
02044 Secretion system [BR:
shin02044
]
LHJ69_18605
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_18605
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_18605
Secretion system [BR:
shin02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LHJ69_18605
RTX toxin transporter
LHJ69_18605
Multiple protein transporter
LHJ69_18605
RaxAB-RaxC type I secretion system protein
LHJ69_18605
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LHJ69_18605
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LHJ69_18605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UDF34572
LinkDB
All DBs
Position
complement(4042728..4044131)
Genome browser
AA seq
467 aa
AA seq
DB search
MPADHKKTMNPMNRLAQARLRIGRLPLALGLLFAAAGAQAQSLQELYDAARAFDATYLAA
RAQAESAQYKAEQANALARPTLGVGLNGTHQQADPPTSYSTVGGQRVQVTGDRVGTTTWQ
SGLNAKYALYNRANAITIEQSRRSLSVAQSDLEAAEQDLIVRVSQAYFDVLAARDVLAAT
RANKAANAEQLASAKRNFEVGTATITDTREAQARYDLSTAQELAAENDLRVKRVTLDQIV
GRAGVEPKPLALPVALPAVAPVTVDPWVAQADELHPLVRKARLGLEVAQLETGKARAADG
VTVDLTGTLGVSNVKGSGAQLPGTTTSGTVGVQVNMPLYTGGYNQNRIKETLSLEEKARN
DLEFARRSVAEGTRRAFLGVQSLQAQVKAYEAAEASSKLALEATQLGYKVGVRVNLDVLN
AQNQLYSTQRDLAKARYDTVLTGLRLRQASGQLRPEDVAAVNQLLAK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgatcacaagaagacgatgaacccgatgaatcgcctcgcccaggcccgcttg
cgcatcggccgtcttcccctggccctgggcctgctgttcgccgccgccggcgcccaggcc
cagagcctgcaagagctctacgacgcggcccgcgcatttgatgccacctatctggccgcg
cgcgcccaggccgagtcggcccagtacaaggccgagcaggccaatgccctggctcgcccg
accctgggcgtgggcctcaacggcacccatcagcaggccgatcccccgaccagctacagc
accgtgggcggccagcgcgtgcaggtcaccggcgaccgcgtgggcaccaccacctggcag
agcggactgaacgccaagtacgcgctctacaaccgcgccaacgccatcaccatcgagcag
tcccgccgctcgctgagcgtggcccagtccgatctggaagccgccgagcaggacctgatc
gtgcgcgtctcccaggcctatttcgatgtgctggcggcccgcgatgtgctggccgccacc
cgcgccaacaaggccgccaatgccgagcagctggcctcggccaagcgcaatttcgaggtg
ggcaccgccaccatcaccgacacccgcgaagcccaggcccgctacgacctgagcaccgcc
caggagctggcggccgagaatgatctgcgcgtcaagcgcgtcaccctggaccagatcgtg
ggccgcgccggcgtggaacccaagcccctggccctgccggtggctctgccggccgtagca
cccgtgacggtagacccctgggtggcccaggccgatgagctgcatcccctggtgcgcaag
gcccgcctgggtctggaagtggcccagctggaaaccggcaaggcccgcgccgccgacggc
gtgaccgtggacctgaccggcaccctgggcgtgtccaacgtcaagggctcgggcgcccag
ctgcccggcaccaccacctcgggcacggtgggcgtgcaggtgaacatgccgctgtacacc
ggcggctacaaccagaaccgcatcaaggaaaccctctcgctggaagagaaggcccgcaac
gatctggagttcgcgcgccgttcggtcgccgagggcacgcgccgcgccttcctgggcgtg
cagtcgctgcaggcccaggtcaaggcctacgaggctgccgaagcctccagcaagctggcc
ctggaagccacccagctgggctacaaggtgggcgtgcgcgtcaacctggacgtgctcaat
gcccagaaccagctctacagcacccagcgcgatctggccaaggcccgctatgacaccgtg
ctcaccggcctgcgcctgcgccaggcttcgggccaactgcgtcccgaggatgtggcggcg
gtgaatcagctgctggccaagtaa
DBGET
integrated database retrieval system
