Shewanella halifaxensis: Shal_2168
Help
Entry
Shal_2168 CDS
T00654
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shal_2168
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_2168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2168
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_2168
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_2168
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shal_2168
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Shal_2168
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Shal_2168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABZ76727
UniProt:
B0TUJ9
LinkDB
All DBs
Position
2619613..2621151
Genome browser
AA seq
512 aa
AA seq
DB search
MPNQLNITQAYTNHKMTIGGVNSFRISTTAFCVACGILLLSGCAMGPDYQRPDLEIPEQF
HHELQQTDEQNVGLKHWREFYLDPELQVLIEHALDQNLDLEGVRSRLLAARAGVTVTDAA
LFPVVGLDANGERALDSALTSTDPVKEDTFYVAGTVSWELDLWGANRRRSEAEFANFISS
QEALNLATISLISDVASRYYEWLDIEQRYQISLNTVELRKKERDLARLRKQNGVISGLQV
RQAEVEYQSARVTLPDLDYERSEKANQLRILLGEFKYPLIPKTEAQLKAEGALFPDSFAV
GVPSQMLSQRPDVKSAEQALVAANANVGVAKTAFFPKFTISGSYGSESESLSDIFDSQGI
TWSLLGGITAPIFNAGKITAQYDIAQEDAKQAMLSYRSTVLGAYFEVNDAMNSFRRSELA
IDAQQELVVASTEYTRLATLRYRNGVSSSLDLMDAQRSLFSAELTLSQVKRDQLLSMITL
YRALGGGVLTSDEMKTELEKTTGEQQVEELTK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatcaacttaacatcactcaagcctataccaatcataagatgacaatcggtggt
gttaactcgtttcgaattagcaccacagcattttgtgtcgcctgtgggattttgctactt
tctggttgtgccatggggccagattaccagagaccagatcttgaaataccggaacaattt
caccacgagttgcagcaaaccgacgagcagaacgttggcctcaagcattggcgtgagttt
tatctcgatcctgagctacaggtattgatagaacatgctcttgatcaaaacctcgattta
gagggagtgcgctcaagactgttagcggcaagagcgggggtaacagttaccgacgctgca
ctatttcccgtagtaggacttgatgcaaatggcgagcgagcattagacagcgcgttgacc
agtaccgatccggttaaagaagatactttttatgttgcgggtactgtttcgtgggaactg
gatctttggggagcgaatcgtcgcaggagtgaagcagaatttgccaatttcatctcttca
caagaagcacttaatttagccaccatcagtttaatcagtgatgtcgccagtcgttattat
gaatggctcgatattgagcaacgttatcaaatatcgcttaatacggtcgagcttcgtaaa
aaggagcgagatcttgccagactgcgaaaacaaaatggtgtgatatcgggcctgcaagtt
aggcaggctgaggtggagtatcaaagtgccagagtcacattgccagatcttgattatgag
cgaagtgaaaaggccaatcagttgcggattttactgggggaatttaaatatccccttatc
cctaaaactgaagcgcagttaaaagctgaaggagcgttgtttcctgactcattcgcagtg
ggggttccatcacagatgttgtcacagcgcccagatgtaaaatccgcagagcaagctctt
gttgcagccaatgccaatgtcggtgtcgctaaaacagcattctttcctaaatttaccatt
agcggcagctatggttctgaatctgaaagcctcagtgacatatttgatagccaagggatc
acttggtcgcttttaggtggtatcaccgcccccattttcaatgcaggtaagatcactgct
caatatgatattgcccaggaagatgcaaaacaggcgatgctcagctatagaagtacagtg
ctcggtgcatactttgaagtgaatgatgcgatgaacagtttcagacgctctgaattggcg
attgacgctcagcaggaattagttgtggcatcaactgaatatacgcgcttagcaacgtta
agataccgaaatggggtttcgagttcattggatttgatggatgctcagcgaagtctgttt
agcgccgaactgactctgagtcaggtgaaacgtgaccagctactgtcgatgattacactt
tatcgtgcgctgggtggtggagtactgaccagtgatgagatgaagactgaacttgaaaaa
acgactggcgagcaacaagtcgaagaacttactaaataa
DBGET
integrated database retrieval system
