Shewanella halifaxensis: Shal_3657
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Entry
Shal_3657 CDS
T00654
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl01503
Cationic antimicrobial peptide (CAMP) resistance
shl02020
Two-component system
shl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Shal_3657
09132 Signal transduction
02020 Two-component system
Shal_3657
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_3657
01503 Cationic antimicrobial peptide (CAMP) resistance
Shal_3657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_3657
02044 Secretion system [BR:
shl02044
]
Shal_3657
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_3657
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_3657
Secretion system [BR:
shl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Shal_3657
RTX toxin transporter
Shal_3657
Multiple protein transporter
Shal_3657
RaxAB-RaxC type I secretion system protein
Shal_3657
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Shal_3657
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Shal_3657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_NPHP3
Motif
Other DBs
NCBI-ProteinID:
ABZ78198
UniProt:
B0TU87
LinkDB
All DBs
Position
4457374..4458681
Genome browser
AA seq
435 aa
AA seq
DB search
MKFKIRSLCAALTLAATAQAAHADDLLQIYQQALTSDPIVLQAQAQRDALYEQIEENRAP
LLPTISANVGYDKAWNDPSADSSGITGGITLNQVIYDHSAWVGLSLAEKAASQADSAYAS
SLQSLIIRVTNAYFDVLTAMDDYEFQGAEKRAIGRQLEQTKQRFAVGLTAITDVHEAQAQ
YDLANAQEILSQNTLANSYEALREITGIDHKQIDILDMNRFSATAVAPASSTDWIKIAET
NSIDLMTTRIGKDIAEETITLYKAGHMPSLSLNAGYNKGIEQEPGNDFDNGTVGVTLSIP
IFEGFKVSSRVNQAQYQYVEASAKLEQTHRQVVKNVRNNFNNVGASISSIRAYEQSVISS
QSALQATEAGFEVGTRTIVDVLNSTRNLYDSKRKLSDARYGYINSILALKQAAGTLNEDD
VASINSGLTAPAVTK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaaatccgttctctatgtgccgcactaacacttgcagctaccgcacaagca
gctcatgctgatgaccttctacaaatatatcaacaagcattgaccagtgatcccattgtg
ctacaagctcaagctcaacgtgatgctttgtatgaacagattgaagaaaaccgtgcgcca
ctactaccaaccatcagtgctaatgtcggttacgacaaagcatggaatgacccaagtgct
gactctagcggtattactggcggcattacgcttaaccaagtgatttacgatcacagcgca
tgggtaggcttaagcctagccgaaaaagccgcttctcaagcagactcagcttatgcatcg
tcgctacagagcttgattatccgtgtcactaacgcttattttgacgtgttaaccgccatg
gatgactatgagtttcaaggcgcagaaaagcgtgcgattggacgtcagctagaacagact
aaacaacgttttgctgtaggtttgacggcgattactgacgtacacgaagcacaggctcag
tatgacttagctaacgcgcaagaaattctaagtcaaaacacccttgctaatagctatgaa
gcattgcgtgaaattacaggtattgatcataagcagatcgatatcctagatatgaatcgc
ttttcagcaacagcggttgcacctgcatcttcaactgattggattaagatcgcagaaacc
aacagcattgacttgatgacaacgcgtatcggtaaagatatcgctgaagagactatcacg
ctttacaaagctggccatatgccatcactgagcttgaatgccggttataacaaaggtatt
gagcaagagccaggaaatgactttgataacggtacggttggcgtaacactaagcattcct
atctttgaaggtttcaaagtgtcttcgcgtgttaaccaagcacagtaccagtatgtagaa
gcaagcgcgaaacttgagcagacacaccgccaagtggttaaaaatgtacgcaataacttt
aacaacgtcggtgcatctatcagctctattcgtgcttacgaacaatcagtgatctcttca
cagagcgcattacaggctaccgaagcgggttttgaagtgggtacccgtactatcgttgac
gtattgaacagtacgcgtaacttatatgattcaaagcgtaagctttctgatgcgcgttat
ggctatatcaactcaattctagcgcttaagcaagctgcgggcaccttgaacgaagatgat
gttgcctcaattaacagcggccttacagctccagcagtgactaagtaa
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