Shewanella sp. W3-18-1: Sputw3181_3590
Help
Entry
Sputw3181_3590 CDS
T00453
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw01501
beta-Lactam resistance
shw01503
Cationic antimicrobial peptide (CAMP) resistance
shw02020
Two-component system
shw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Sputw3181_3590
09132 Signal transduction
02020 Two-component system
Sputw3181_3590
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sputw3181_3590
01503 Cationic antimicrobial peptide (CAMP) resistance
Sputw3181_3590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_3590
02044 Secretion system [BR:
shw02044
]
Sputw3181_3590
01504 Antimicrobial resistance genes [BR:
shw01504
]
Sputw3181_3590
Transporters [BR:
shw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputw3181_3590
Secretion system [BR:
shw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Sputw3181_3590
RTX toxin transporter
Sputw3181_3590
Multiple protein transporter
Sputw3181_3590
RaxAB-RaxC type I secretion system protein
Sputw3181_3590
Antimicrobial resistance genes [BR:
shw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Sputw3181_3590
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Sputw3181_3590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
VPS51_Exo84_N
Motif
Other DBs
NCBI-ProteinID:
ABM26399
UniProt:
A0A6N3J9H2
LinkDB
All DBs
Position
complement(4103433..4104827)
Genome browser
AA seq
464 aa
AA seq
DB search
MKRSRVAWLCLLSVPFLLPSALHAEPISFSDAWQQVLKVSDKLQAQSQEVNRAKGEQQAG
EGLNLPSLDIRGNYIHLDKPIEFDLKELNSVVSIPPALGGIIAGIPPLPLSEQDIFSASL
QAMWPIYTGGQITAAQGIHAAMVAEKQQELQLATRDLFTQLVDRYYAVDVTQALVETQTD
LVGSLTKHVEHALAMEREGQIAKVERLNAQVALDNAKVNLGSASRQHEMAVIALARMLQQ
SQVSTHSPLFVLPHAPSLDQLSQMTLSQHPALKLLEAKEAQANGLVSLEKGKYHPTVFLF
GNYTLYEEDTLLSSITPDWMVGVGVNVPLISRDGRSGKVEAAKSALLQARYTKAQTKQDL
SLLVDQSYRQLLQAEEEVKALDTSLELATENLRLREIAFNQGLSTSIDRVDAELKLSAVK
TQQLAARYRYVQAYARLMAISGQLDEFIGRTVDRHPVQEINHAR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatcacgagtggcttggctgtgtttactgtcagtgccttttttattgccatcg
gctttgcatgcagagccgataagcttcagtgacgcttggcaacaagtgctgaaggtgagc
gataagctacaggcgcagtcgcaggaagttaaccgtgctaaaggcgagcagcaggccgga
gaggggttaaacttaccctccttagatattcgcggtaactatattcatttggataaaccg
atagagtttgatttgaaagaattaaattcagtggtttctattccaccagcccttggcggc
atcatcgcgggtattccgccgctgcccttaagtgagcaagatatttttagtgcgagcttg
caggcaatgtggccgatttatacgggtgggcagatcaccgccgctcaaggtatacacgcg
gccatggtggccgaaaaacaacaagaattacaattagccacccgcgatttatttacccag
ttggtggacagatattatgctgtcgatgtgactcaggcattagttgagacccaaaccgat
ctggttggctccttaacaaagcatgttgaacatgctctagcaatggagcgcgaagggcaa
attgcgaaggttgagcgcctcaatgctcaggtcgctttagataatgctaaagtcaattta
ggtagtgccagccgccaacatgaaatggctgttatcgcgctggctcgtatgctccagcaa
agtcaggtgagtacccattcccctttattcgtactgccgcacgctccatcgttagatcaa
cttagccaaatgaccttaagccaacatccagcactcaaattgctcgaagcgaaagaagcg
caagcgaatggtttagtatcattagaaaaggggaaataccacccaacggtattcctcttt
ggtaattacaccttgtatgaagaagacacactcttatcgagcattacgcctgattggatg
gttggtgtcggagttaatgtgccgctgatcagccgtgatggccgcagcggtaaggtcgaa
gccgcgaaaagtgccctactgcaagcccgctataccaaggcacaaaccaagcaagactta
agcctgctggtggatcaaagctatcgccaattattacaggccgaagaagaagtgaaggcg
cttgatacctcactcgagcttgcgaccgaaaatctgcggcttagggagattgcttttaat
caagggctttccacttctatcgaccgagtcgatgccgagctaaaactgagcgcagtgaaa
acccagcaattggctgcccgttatcgttatgtgcaagcctatgccagattgatggcaatc
agtggtcaattagatgaatttattggtcgtaccgtcgatcgtcacccagtgcaggagata
aatcatgcgcgctaa
DBGET
integrated database retrieval system
