Sphingobium xenophagum: CJD35_12470
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Entry
CJD35_12470 CDS
T05146
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
shyd
Sphingobium xenophagum
Pathway
shyd01501
beta-Lactam resistance
shyd01503
Cationic antimicrobial peptide (CAMP) resistance
shyd02020
Two-component system
shyd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CJD35_12470
09132 Signal transduction
02020 Two-component system
CJD35_12470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CJD35_12470
01503 Cationic antimicrobial peptide (CAMP) resistance
CJD35_12470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_12470
02044 Secretion system [BR:
shyd02044
]
CJD35_12470
01504 Antimicrobial resistance genes [BR:
shyd01504
]
CJD35_12470
Transporters [BR:
shyd02000
]
Other transporters
Pores ion channels [TC:
1
]
CJD35_12470
Secretion system [BR:
shyd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CJD35_12470
RTX toxin transporter
CJD35_12470
Multiple protein transporter
CJD35_12470
RaxAB-RaxC type I secretion system protein
CJD35_12470
Antimicrobial resistance genes [BR:
shyd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CJD35_12470
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CJD35_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6924
Motif
Other DBs
NCBI-ProteinID:
ASY45162
UniProt:
A0A249MV49
LinkDB
All DBs
Position
I:complement(2558506..2559975)
Genome browser
AA seq
489 aa
AA seq
DB search
MKRALPLVPALMLALAASPGLAQTALDYRTAETAMEATPAGTVAAQADLRAAEHQAKAVA
HLYRPTVIASASVIAYEKSLSLDLTGPKEQFLGGAQNYLGGLPGQYPPGYADIVALIAGR
IGQALPGLLAPIPDQFDYTQRDVVVRPNVTAIMPLYTGGALEAVSDAAKAQVTLAQGGRE
LARGADSVRLAETYFGAQLARQLEVSSRQTLTSAEQHLGNVRAMEREGVVPHSLTLEAVV
ARDAAKRANDRARRDADMAQLALARITGTANPVPSTPLFVNTTPLPPLTAWTGDVPRNGQ
IAMAEGAEQLAAAGERAARATMRPSVYAFGSVNAVRKQSLPVDPDWIVGATVQVPLFSAV
NRRELVAAAQARREAARLRAADARTRTEGEIEKTWLMADNARRAFASIASSVAAAEENLR
VKQIGFREGVGTAAEVTDAQTALGLARAQRATAAYEYDLSLAALFAASGQSERFVDYAQA
PDRQTVDDR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccctgcctctggtgccggcactgatgctggctcttgccgccagtcccggg
ctggcgcaaactgcgctcgattaccgtacagcggaaaccgctatggaggccaccccggca
ggaacggtggcggcccaagccgacctgcgcgccgccgagcatcaggccaaagccgtggcg
catctttaccgcccgaccgtcatcgcctcggcctcggtcatcgcctacgaaaaatcgctg
agccttgacctcacagggcccaaggagcagttcctcggcggtgcccagaactatctcggc
gggctgccggggcagtatccgccgggctatgccgatatcgtcgcgctgatcgcggggcgg
atcggccaggccctgcccggcttgctcgcgccgatccctgatcagtttgactatacccag
cgggatgtcgtggtgcggccgaatgtcaccgcgatcatgccgctgtacaccggcggcgcg
ctggaggcggtgagcgacgcggccaaggcgcaggtcacgctggcgcagggcggccgcgag
ctggcgcgcggggcggacagcgtgcggctggccgaaacgtattttggcgcccaactcgcc
cgccagctcgaggtgtcgagccggcagacgctgacctccgccgaacagcacctgggcaat
gtccgcgcgatggagcgcgaaggggttgtgccgcattcactcacgctggaagcggttgta
gctcgcgatgccgcaaagcgggcaaacgatcgggcgcggcgcgatgccgacatggctcaa
ctggcgctcgcccgcatcaccggcacggccaaccccgtgccatccaccccgctattcgtc
aatacgacgccgctgccgccgctgacggcgtggacgggcgatgtcccgcgcaatgggcag
atcgccatggccgaaggcgccgaacagctcgccgccgccggagagcgcgccgcgcgggcg
accatgcggccttcggtctatgccttcggatcggtcaacgccgtgcgaaagcagtcgctg
ccggtcgatcccgactggatcgtcggcgcgacggtgcaggtccccctgttttccgcagtc
aaccgccgcgaacttgtagccgcagcccaggcccgccgcgaagccgcccgtctgcgcgca
gccgacgcccgcacccgcaccgagggcgagatcgagaagacctggctgatggccgacaac
gcccggcgcgcctttgcctcgatcgccagcagcgttgccgcggcagaggaaaacctgcga
gtcaagcagattggcttccgcgaaggcgtcgggaccgcggcagaagtgaccgatgcccag
accgcgcttggccttgcccgtgcccagcgtgcgacggcggcttacgaatacgacctttcg
cttgccgcgctgttcgccgccagcgggcaaagcgaacgcttcgtcgattacgcccaggca
cccgacaggcagaccgtcgatgaccgataa
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