Candidatus Sulfidibacterium hydrothermale: LA303_03650
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Entry
LA303_03650 CDS
T07944
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr01501
beta-Lactam resistance
shyr01503
Cationic antimicrobial peptide (CAMP) resistance
shyr02020
Two-component system
shyr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LA303_03650
09132 Signal transduction
02020 Two-component system
LA303_03650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA303_03650
01503 Cationic antimicrobial peptide (CAMP) resistance
LA303_03650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_03650
02044 Secretion system [BR:
shyr02044
]
LA303_03650
01504 Antimicrobial resistance genes [BR:
shyr01504
]
LA303_03650
Transporters [BR:
shyr02000
]
Other transporters
Pores ion channels [TC:
1
]
LA303_03650
Secretion system [BR:
shyr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LA303_03650
RTX toxin transporter
LA303_03650
Multiple protein transporter
LA303_03650
RaxAB-RaxC type I secretion system protein
LA303_03650
Antimicrobial resistance genes [BR:
shyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LA303_03650
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LA303_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
UBM63077
LinkDB
All DBs
Position
936018..937352
Genome browser
AA seq
444 aa
AA seq
DB search
MNRKQNIIRMKTFLLSIVVAFMPLFSLAQSQINDSLTLEKAIRLATNNQPLLHEAEDYVK
MAEGRVKQSESSKYPQISADLYYDYIGPVSSITMPFPGGGSFDLTPAHNYDGHVNVQYLI
FDFHRRDEWIRLMQSAKLAESEKINLLKNQLAYRTVQAFYSVLFLQESLKVKDEQIHDLL
QHLATAKKLVETGSAVSLDTLTTRVRVTAVETQKIGIENMLKQNEIVLKSLLNFHKDTLI
HLSGRFVKAVPPLSVDSLIQTAFAYREEIKLTKISQQSAQIQKNLARLSAAPTLSAIGSY
GLKDGYPESLYKLRSNWVLGMAAHFPIFEGNLKKAKMETADWQIQALQNHLSALQKTISR
QVQQAESDLMTSVKQLKMAKEEIISAQVAVQQARVQYKSGYVTNLALLDAETSLTRAKLA
YLAGLYKITLNKYRLMETMGLRIW
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaaacaaaatatcatccggatgaaaacttttcttttgtcgattgttgtggct
tttatgcctttgttttcgctggcacaaagtcaaatcaatgattcgttaacactggaaaaa
gccattcgtttggcgaccaataaccaaccgttactacacgaagcggaagattatgtgaag
atggccgaaggacgcgtaaaacaatcggaaagcagcaaatatccgcagatctcagccgat
ctttattacgattatatcgggccggtttcttctattacgatgcctttccccggcggagga
tcgttcgatttgactccggcacataattatgatggtcatgtgaatgtgcagtacctgatt
tttgattttcaccggcgtgatgaatggatacgcctgatgcaatcggcaaagctggccgaa
tcagagaaaatcaatttgttaaaaaaccagttggcctatcgtaccgtacaggctttttat
tctgttttgtttttgcaggagagcctgaaggtaaaagatgaacagattcacgacttgttg
caacatctggctacagccaaaaaattggtggaaacgggttctgcagtgagtctggatact
ttgaccacgcgggtgcgggtaacagctgttgaaacacaaaaaatcggtatcgaaaatatg
ctgaaacaaaacgaaattgttttgaagtcgttgttgaattttcataaagataccctgatt
catttatccggccggtttgttaaagccgttcccccgttgtcggttgattcgttgatacaa
acggcttttgcctatcgtgaagagataaaactgacaaaaatcagccaacagtcggcacag
attcaaaaaaatctggcccgtttaagtgctgcgcctacattaagtgccataggaagttat
gggttaaaagacgggtatcccgaatcgttgtacaagttacggagtaactgggtgctcggg
atggcggcacattttcccatttttgaaggaaacctgaaaaaggcaaaaatggaaaccgcc
gactggcagattcaggcattacaaaaccatttgtcggcattgcaaaagacaatcagccgc
caggtgcagcaggccgaatcggatttaatgaccagtgttaaacagctgaagatggccaaa
gaagaaattatcagtgcacaggtagctgtgcaacaggcccgtgtgcagtacaaaagcgga
tatgtaactaacctcgctttgctggatgccgaaacatcgctgacgcgtgctaaactggct
taccttgccggtttatataaaattacactgaataaataccggttaatggaaaccatggga
ttgagaatttggtga
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