Ruegeria pomeroyi: SPO1240
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Entry
SPO1240 CDS
T00215
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil01501
beta-Lactam resistance
sil01503
Cationic antimicrobial peptide (CAMP) resistance
sil02020
Two-component system
sil03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SPO1240
09132 Signal transduction
02020 Two-component system
SPO1240
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPO1240
01503 Cationic antimicrobial peptide (CAMP) resistance
SPO1240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1240
02044 Secretion system [BR:
sil02044
]
SPO1240
01504 Antimicrobial resistance genes [BR:
sil01504
]
SPO1240
Transporters [BR:
sil02000
]
Other transporters
Pores ion channels [TC:
1
]
SPO1240
Secretion system [BR:
sil02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SPO1240
RTX toxin transporter
SPO1240
Multiple protein transporter
SPO1240
RaxAB-RaxC type I secretion system protein
SPO1240
Antimicrobial resistance genes [BR:
sil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SPO1240
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SPO1240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AAV94533
UniProt:
Q5LU19
LinkDB
All DBs
Position
1308539..1309957
Genome browser
AA seq
472 aa
AA seq
DB search
MLRTLTGRLSRMAVLAAGVAVIAIAPRPAVADNLADALIGAYNTSGLLEQNRALLRAADE
DVAIALSALRPIVNWTARIQTTYNRSGNAIASTTATPDTFFAGLELTQLLYDGGAARLGR
QAAQETVLATRQALVQIEQQVLFRAVTAYLNVLLQEETVGIRQNNVRLLGEELRASQDRF
EVGEVTRTDVALSESRLANARANLADANGALTTAHAEYINAVGRHPGRTTGQPAMPGLPR
SEDDAAALALRNHPSLIGAQHQVRALDLVVGQQRANLGPNVRFQAELGFTDDFGGTTFND
SASASVIYSQPLYAGGRLNASVRRAMAQRDASRANLLNVQRNVTQDVSNAYVRFQTANAS
LTASAERVRAAQVAFDGIREEATLGARTTLDVLTAEQDLLDAQLARISARTERSLAAYQL
LASQGLLTAERLGLAVQIYDPTLYYNMVKDAPAAISKRSRDLDRVLEALGKK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggacgcttacgggacgactgtcgaggatggcggtgctggctgcgggggttgcg
gtcatagccatcgcgcccagaccggcagttgcggataacctcgccgatgcgctgatcggg
gcctacaacaccagcggcctgttggaacagaaccgcgcgctgctgcgcgccgcggacgaa
gatgtcgccatcgccctgtcggcgttgcgcccgatcgtgaactggaccgcccggatacag
accacctacaaccggagcggcaatgcgatcgcctcgaccacggcaacacccgacacgttt
tttgccggccttgaactgacgcagctgctctatgatggcggtgcggcccggctgggcagg
caggccgctcaagagacggtgctggccacccgtcaggcgctggttcagatcgaacaacag
gtcttgttccgcgcggtcaccgcctatctcaacgtgttgctgcaagaggaaacagtcggc
atccgccagaacaacgtgcggctgctgggcgaagaactgcgcgcctcgcaggaccggttc
gaggtcggcgaggtgacccgcaccgacgtggccctgtcggaatcgcggcttgccaacgcc
cgcgccaatctggccgatgccaatggcgcgctgaccaccgcgcatgccgaatatatcaac
gcggtcgggcgccatccgggccgtaccactgggcagccggcgatgccgggcctgccgcgc
agcgaggatgacgcggcggccctggccctgcgcaaccacccctcgttgatcggagcgcag
caccaggtgcgtgcgcttgatctggtggtcgggcagcaacgcgccaatctggggcccaat
gtacggtttcaggccgaacttggctttaccgatgatttcggcggcaccaccttcaacgat
tctgcctctgccagcgtgatctattcgcagccgctctatgcgggcggtcgtctgaacgcc
tctgtgcgccgggccatggcccagcgcgatgcctcgcgggccaacctgctgaacgtgcag
cgcaatgtgacccaggatgtcagcaacgcctatgtccgttttcagaccgcgaatgccagc
ctgaccgcctcggccgaacgggtgcgcgccgcgcaggtcgcctttgacgggatccgcgaa
gaggccacgctgggcgcccgtaccacactggacgtcctgaccgccgagcaggacctgctg
gatgcgcagctggcgcggatttcggcccgtacagaacgttcgcttgcggcctatcagctg
ctggcctcgcagggcctgctgacggccgagcggctggggctggcggtgcagatctacgac
ccgaccctctattacaacatggtcaaggacgcgccggcggcgatctcgaaacgcagccgc
gatctggaccgtgttctggaagccctcggcaagaagtga
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