Stenotrophomonas indicatrix: DAIF1_13800
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Entry
DAIF1_13800 CDS
T07128
Symbol
tdeA
Name
(GenBank) toxin and drug export protein A
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc01501
beta-Lactam resistance
sinc02024
Quorum sensing
Module
sinc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DAIF1_13800 (tdeA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DAIF1_13800 (tdeA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_13800 (tdeA)
01504 Antimicrobial resistance genes [BR:
sinc01504
]
DAIF1_13800 (tdeA)
Transporters [BR:
sinc02000
]
Other transporters
Pores ion channels [TC:
1
]
DAIF1_13800 (tdeA)
Antimicrobial resistance genes [BR:
sinc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DAIF1_13800 (tdeA)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DAIF1_13800 (tdeA)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DAIF1_13800 (tdeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QBR43831
LinkDB
All DBs
Position
complement(1539097..1540536)
Genome browser
AA seq
479 aa
AA seq
DB search
MKMMTRLPFPAPSRLLLSGAVLLALSACASVGRYPVEDPSVAATYGRGDATLNAPADDPR
SGLDTPARDVRQDNWWTGFGDERLDRLVAQALAANSDLGAAGLAVQRARLQAGLASNALW
PQPSSSGVSGSGSRATDQADDWRRSYSTGVSLGWEIDLWGRLRTQRDIARWEANASEEDR
QNTALLVIGDVINQYWALAYLNQSIATGQANLERLQRTHELVQARFEAGAVSRLEVRQAL
QNLQSQRSAQSALEQQRVEVRNALTVLLDGTPWPQQDEPQNLLEAQSPSIAEGLPADLLG
RRPDLRAAELRLRNSLKTIRVTATQYYPALSLTGSLGSSATSLGDVLRNPVATLGAGLSL
PFLNLQRAQLDTDVAGTNYQIAATNFRKTLYTALSEVDNALSAREQLLRQVTASQASYDE
AVEVERAQEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQSQLNNDVTLFKALGGSAG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgacccgactgcccttccccgctccctcgcgcctgctgctgtccggcgcc
gtgctgcttgcactctccgcctgcgcttccgtgggccgctatccggtcgaagaccccagc
gttgccgccacctatggtcgtggcgatgcgaccctcaacgcgccggctgacgacccgcgc
agcggcctggacaccccggcccgtgacgtccgccaggacaactggtggaccggcttcggc
gacgagcgcctcgaccgcctcgtcgcgcaagcgcttgccgccaacagcgacctcggtgcg
gccgggctggcggtgcaacgtgcacgcctgcaggccgggctggccagcaacgcgttgtgg
ccgcagccttcgtcgtccggcgtgagcggcagcggcagccgcgccaccgaccaggccgac
gactggcgccgcagctattccaccggcgtgtcgctggggtgggaaatcgatctgtggggc
cgcctgcgcacccagcgcgacatcgcccgctgggaggccaacgccagcgaagaagaccgg
cagaacaccgccctgctggtgatcggcgatgtcatcaaccagtactgggccctggcctac
ctcaaccagtccatcgccaccggccaggccaaccttgagcggctgcagcgcacgcacgaa
ctggtacaggcgcgcttcgaggccggtgcggtttcgcgcctggaagtacgccaggcactg
cagaatctgcagtcgcagcgttcggcgcagagtgcgctggaacaacagcgggtggaggtg
cgcaacgcgctgaccgtgctgctggatggcacgccgtggccgcagcaggacgaaccgcag
aacctgctggaggcacagagcccgagcattgccgaaggcctgcccgccgacctgctcggc
cgccggcccgacctgcgcgcggccgaactgcggctgcgcaacagcctgaagacgatccgg
gtgaccgccacccagtactacccggcactgagtcttaccggcagcctgggttccagcgcc
acctcgctgggcgatgtgctgcgcaatccggtggcgacgctgggggctgggctgtcgctg
cccttcctcaacctgcagcgcgcgcagctggatacggacgtggccggcaccaactaccag
atcgccgccaccaacttccgcaagacgctgtacaccgcgctgtcggaggtggacaacgcc
ttgtccgcacgcgagcagctgctgcgccaggtaactgcgtcgcaggcgtcctacgatgaa
gcggtggaagtggaacgtgcgcaggaagtgcgctatcgcgtgggcgccaccgatctgcgc
acctggctggaagcacagcagacccggcgcgacgcggaactgtcactggcacgggtgcgg
cagagccagttgaacaacgacgtgacgctgttcaaggcgttgggaggcagcgcggggtaa
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