Ruegeria sp. TM1040: TM1040_1991
Help
Entry
TM1040_1991 CDS
T00359
Name
(GenBank) Type I secretion outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit01501
beta-Lactam resistance
sit01503
Cationic antimicrobial peptide (CAMP) resistance
sit02020
Two-component system
sit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TM1040_1991
09132 Signal transduction
02020 Two-component system
TM1040_1991
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TM1040_1991
01503 Cationic antimicrobial peptide (CAMP) resistance
TM1040_1991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_1991
02044 Secretion system [BR:
sit02044
]
TM1040_1991
01504 Antimicrobial resistance genes [BR:
sit01504
]
TM1040_1991
Transporters [BR:
sit02000
]
Other transporters
Pores ion channels [TC:
1
]
TM1040_1991
Secretion system [BR:
sit02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
TM1040_1991
RTX toxin transporter
TM1040_1991
Multiple protein transporter
TM1040_1991
RaxAB-RaxC type I secretion system protein
TM1040_1991
Antimicrobial resistance genes [BR:
sit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
TM1040_1991
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
TM1040_1991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABF64723
RoseoBase:
TM1040_1991
UniProt:
Q1GF43
LinkDB
All DBs
Position
complement(2096154..2097575)
Genome browser
AA seq
473 aa
AA seq
DB search
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADE
GVAATVARLRPVITATLAIARDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLD
QAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIVALRQNNLRLLQEELRAANDR
FEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNA
DNFDLGLSLNQTLYAGGALAAARRADLARLDAERGALISIQRSISSSAASAYTAFETAAA
SLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQELLDAQTARLSARANQALAAYQ
LLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaactattgaaatcaaagcgtattaaggcttttgcgacaatcggcgtcctcgcc
acggccgtcttgagcgccccgcaggcgcgtgcggataatgtcaccgacgcgatgatcggc
gcctatacaagcagcggccttctggaacagaaccgagccctgctgcgtgccgcagacgaa
ggggttgcggccacggttgcgcggctgcgtccggtgattacagccaccctcgcgattgca
cgcgattacaaccgcacgggctttgggactgggggcgcgcgctccagccacagcacgggt
gcctccttgcgcctcggcatggagtggttgctctttgacaatggtgccacgcagctcgat
caggcagcggcgcaggaaaccgtccttgcaacccggcagacccttctggacgtggagcag
caggtgctgttcgcggctgtgcaggcttatgtcaacgtcctgactcagcaggatatcgtt
gcgctgcgtcagaacaacctgcgcttgctgcaggaagagctgcgcgctgccaacgaccgt
ttcgaagtgggcgaagtgacgcgcaccgatgtcgctctggccgaaagccgggtggctgag
gcacgtgccaacctgaccgatgcacgcggtgccttgctgaccgcacgcgccacctatgaa
gaggtggtcggacgcgcgccgggggcggtggcgtcctatccgccgttgccgcgccgcgcg
gcatcgctttcggatgcacaggcgctggcgttgcgcagccatccgagcctgcgtgcgcag
cagcattcggtgcgggcggcgcagcttaccgccgacagctctttgcgcgacatgggcccc
aatgtgaaattcaccgccagtgcgactcatagcgaggtgcacagcagcgactccaatgct
gacaactttgatctcggcctttcgctcaaccagaccctttatgcgggtggcgctctggct
gccgcgcgccgggcggatctggcacgcctcgatgcagagcgcggcgctttgatttcgatt
cagcgcagcatctccagcagcgcagcaagtgcctataccgcgtttgaaaccgccgccgcg
agccttgtgtcctcgaaccagcgcgtgcgcgcagcgcaggtcgcttttgacgggatccgc
gaggaagccacgctgggatcgcgcaccacgcttgatgtgcttcaggccgagcaggagctt
ctggatgcacaaacggcccgtttgtcggcgcgtgccaatcaggcgctggcggcttatcag
ctgttgcaggcgcagggtttgttgacggctgagaacctcaatctcgcggtcgagcgatat
gaccccgaactctatcacaaccaggtgcgttcggctccggcctttgtcaccaagcgtggg
caggatctggaccgcgtgctcaaggctctgagaaaaaactga
DBGET
integrated database retrieval system
