Scomber japonicus (chub mackerel): 128354290
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Entry
128354290 CDS
T09718
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00230
Purine metabolism
sjo00232
Caffeine metabolism
sjo00983
Drug metabolism - other enzymes
sjo01100
Metabolic pathways
sjo01232
Nucleotide metabolism
sjo04146
Peroxisome
Module
sjo_M00546
Purine degradation, xanthine => urea
sjo_M00958
Adenine ribonucleotide degradation, AMP => Urate
sjo_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
128354290 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
128354290 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
128354290 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128354290 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128354290 (xdh)
Enzymes [BR:
sjo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
128354290 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
128354290 (xdh)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
128354290 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
CO_deh_flav_C
Fer2_2
Fer2
Motif
Other DBs
NCBI-GeneID:
128354290
NCBI-ProteinID:
XP_053170512
LinkDB
All DBs
Position
24:complement(1236447..1259395)
Genome browser
AA seq
1015 aa
AA seq
DB search
MVREENMTGTENMNGTGSVNRSDELIFFVNGKKIVEKNAEPEMNLLTYLRRKLRLTGTKL
GCAEGGCGACTVMLSRYQTHTQQLTHHAVNACLAPLCSLHLVAVTTVEGIGSVARKLHPV
QERIAKSHGSQCGFCTPGIVMSMYALLRTNPKPTMADMEEAFQGNLCRCTGYRPILEGYK
TFTVEGGCCGGRGRDNGCCMTNGNAQEEPSENADDSSSSLFNAADFEPFDPTQEVIFPPE
LMSLSKGQRSSSLCFHGDRVAWMQPDSLSEFLQLKWKHPEARIVTGNTEVGIEMKFKNML
YPVILAPTFIPELNAVTHTEDGVVFGAACTLSHMGEVLRQAVATLPPHQTEVFLAVLEQL
RWFAGQQIRNVAAVGGNIMTASPISDLNPVFMAAGCKLTLMDKDGSRVVQMDDKFFPGYR
KTILRPQEILLSVEIPYSKKSQFVSAFKQSPRREDDISIVTAAMSVTFTPGTDSVEGLRL
SYGGMAPTTVLAKKTASKVLGRRWGEELLEEVCTSLAEEMTLDPSVPGGMVTYRRTLTLS
LFYKFYLTVLQKLRQQGVGVDEVRSDCVSATEIYHPETPSSVQIYQAVPEGRSQDDVVGR
PVMHLSAMKQATGEAVYCDDVPLYENELYLSLITSSKAHANILSIDTAAAQSMPGVVSFL
FADDVPGSNATGPIAYDETVLADRQVTCVGHIIGAVVADTQLNAQRAAKAVKIQYEELQP
VVTIQEAIAAQSFYEPIRTIQRGDLEAGFKQADHILEGEMHMGGQEHFYLETNVSLAVPR
GEDGEMELFVSTQSAAKTQSLVAKALGVPANRVVVRVKRMGGGFGGKESRTTVLSTVVAV
AANKLNRPVRCMLDRDEDMLITGGRHPFYGKYKVGFMNSGKVVALDVSYYSNTGNSMDLS
LSIMERALFHMDNSYNVASVRGRGFMCRTNLPSNTAFRGFGGPQGMMIAESWMTDVAQSL
GRPAEEVRRLNLYAEGDATPFNQILDQFTLDRCWDECLARSQYEERRAAIQLYNR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggaggagaacatgaccgggaccgagaacatgaacgggaccggttccgttaac
cggtctgatgagctcatcttcttcgttaacggcaaaaagattgttgagaagaacgcagaa
cctgagatgaaccttctgacctacctgaggaggaaattgcgtcttacaggaactaagctg
ggctgtgctgaaggaggatgtggagcttgcaccgtcatgttgtccagataccaaacacac
actcaacagctgactcatcacgccgttaacgcctgcctcgcaccgctctgctctttacac
ctggttgccgtgacgaccgtggagggcatcggcagcgtggcgcgaaagcttcacccggtc
caggagaggatagcgaagtctcacggctctcagtgtggtttctgcacaccaggcatcgtc
atgtccatgtacgctctgctgaggacgaaccccaaaccaaccatggccgacatggaggaa
gccttccaagggaatctgtgtcgttgtaccggatacagaccgatactggaaggatacaag
acctttactgtggaggggggctgctgtggaggccgggggcgggacaacggctgctgtatg
accaatgggaacgctcaggaggaaccatcagagaacgctgacgattcttcttcgtctctt
tttaacgcagcagattttgaaccttttgacccgacacaggaagtgatcttccctcctgag
ctcatgtctctgagcaaaggtcagaggtcgagctcgctgtgtttccatggcgacagggtg
gcgtggatgcagccggacagtctgagcgagtttctgcagctgaaatggaaacacccagaa
gctcgaatagtgacaggaaacactgaagtgggtattgagatgaagtttaagaacatgttg
tatccggtcatcttggctccgactttcatccctgaactgaacgcagtgacgcacactgag
gatggcgtggtgttcggtgcagcgtgcactctcagccacatgggggaggtgctgaggcag
gcggtggcgactcttcctcctcaccagaccgaagtcttcctcgccgtcctggagcagctg
cgttggttcgcagggcagcagatacgaaacgtcgctgctgttggaggaaacatcatgact
gctagtcctatatcagacctcaaccctgtttttatggctgctggctgcaaactcacactg
atggacaaagacggcagccgtgtggttcagatggacgataagttcttcccaggttacagg
aagacgattctgcgcccgcaagagatcctgctgtctgtggaaatcccctacagcaagaag
agtcagtttgtctcggccttcaaacagtctcctcgcagagaagatgacatcagcatcgtc
accgcggcgatgagtgtcaccttcaccccgggaaccgactccgtggagggcttgaggctg
agctacggtggcatggcgccgaccacggtgctggcgaagaagacggcaagcaaagtgttg
ggaaggcggtggggggaggagcttctggaggaggtttgcacctcattggctgaggagatg
acccttgacccctcggtgccaggcggcatggtgacgtaccggcgaactctgaccctcagc
ctcttctacaagttctacctgacagtcctgcagaagctccggcagcagggtgtgggtgtg
gacgaggtgaggtctgactgtgtgagtgcgacagagatttatcatccagagactccgtcc
agcgttcagatctaccaggcggtgccggaggggcggagtcaggacgacgtggtgggccga
cctgtgatgcacctgtcggctatgaagcaggcgacaggtgaggcggtttactgcgacgac
gtcccgctgtacgagaacgagctctacctgtcactgatcaccagcagcaaggcacacgct
aacatcctctccatagacacagcagcagcacagagcatgcccggcgtcgtcagcttcctg
tttgctgacgacgttcccggcagcaacgccaccggaccgatcgcatacgacgagaccgtc
ctcgccgaccgccaggtaacgtgcgtgggtcacatcatcggagccgttgtggccgacacg
cagctgaacgcgcagagagccgccaaggccgtcaagatccagtacgaagagctgcagcct
gtcgtcaccatccaggaagccatcgctgcccagtccttctatgagccaatcagaaccatc
cagaggggagacctggaggcgggctttaaacaggccgaccacatcctggagggtgagatg
cacatgggaggtcaggaacatttctacctggagacgaacgtgagtctggcggttcctcga
ggagaagacggagagatggagctgtttgtgtccacgcagtcagccgccaagactcagtct
ctggtagcgaaggcgttgggcgtccccgctaacagagtggtggtgcgggtgaagaggatg
ggcggaggcttcggggggaaggagagccggaccaccgtcctgtccaccgtggttgccgtg
gcagcaaacaagctgaaccggccggtcaggtgcatgctggacagagacgaagacatgttg
atcaccggaggacgacaccctttctacgggaaatacaaagtgggtttcatgaacagtggg
aaggttgtagcgttggacgtgtcgtactacagcaacacaggaaactccatggacctctct
ctgtctataatggagcgcgctctgttccacatggacaactcgtacaacgtggccagcgtg
cgcggccgcggcttcatgtgccgcaccaacctgccgtccaacaccgccttcaggggcttc
gggggtcctcagggcatgatgatcgctgagagctggatgacggacgtggctcagagtctg
ggccggccggcggaggaagtgcgtcggctcaacctgtacgccgagggagacgctacgccc
ttcaaccagatcctggaccagttcactctggaccgctgctgggacgagtgtctggctcgc
tcccagtacgaggagcgccgagccgccatacagctctacaacaggtag
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