Scomber japonicus (chub mackerel): 128354415
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Entry
128354415 CDS
T09718
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00260
Glycine, serine and threonine metabolism
sjo00270
Cysteine and methionine metabolism
sjo00670
One carbon pool by folate
sjo01100
Metabolic pathways
sjo01230
Biosynthesis of amino acids
Module
sjo_M00035
Methionine degradation
sjo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128354415
00270 Cysteine and methionine metabolism
128354415
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128354415
Enzymes [BR:
sjo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
128354415
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Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
128354415
NCBI-ProteinID:
XP_053170630
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All DBs
Position
24:8421553..8432725
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AA seq
602 aa
AA seq
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MPSVPLSKETPVKGPVCPHAAKLLNHTNGEAKLREGSFPLNGVDKLPAVDAEEANGALQL
NTKNAAAERKWIRPDLPSRCKWSLGASKAESPHTQVPRGVNPTILPNILHRIGETPMVRI
NKIPKAFGLRCEILAKCEYFNAGGSVKDRISLRMVEDAERAGVLKPGDTIIEPTSGNTGI
GLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAWRLKN
EIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKERC
PNIKIVGVDPEGSILAEPEEINKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSNDEESF
NMSRMLIRDEGLLCGGSSGTAMAAAVNVAKELKEGQRCVVLLPDSIRNYMSKFLSDKWMV
QKGFLREEDLMVKKPWWFNLKLQGLNLSAPLTVLPTVTCQKTIKILKEKGFDQAPVVDES
GLILGMVTLGNMLASILAGKIRLSDPVSKVLYKQFKQIRLTDNLGKLSRILETDHFALVV
HEQIQSGLEYCQMLVPPSDLTDGSPSLKQMVFGVVTAVDLLNFVTGVERRERSLSESTDE
LC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagttcccttgtccaaagagactcccgtcaagggccccgtctgcccccacgct
gccaaactactcaaccacaccaatggagaagccaaactccgggagggttcgttcccactg
aacggggttgacaagctgcccgcagtggacgctgaggaggccaatggagcccttcagctg
aacacaaagaacgctgctgctgagaggaaatggatccgtcccgacctgcccagccgctgc
aaatggagcctgggagcctcaaaagcagagtcccctcatacacaagttccaaggggggtt
aatccaaccattcttccaaacatcctgcacaggattggtgagactcccatggtacgcatc
aacaagatccccaaagcgtttggactccgttgtgaaatattggccaagtgtgagtacttc
aacgccggcggcagtgtcaaggacaggatcagtctacggatggtggaggatgctgagaga
gctggcgtcctcaagcctggagacaccattatagagcccacctctggaaacactggtatc
ggattggcactagctgcagctgtgaagggctaccgctgcatcattgtcatgcctgagaaa
atgagcatggagaaggtggatgtcctgagagctctcggagcagagatcgtccgtacaccc
accagtgctcgttttgattcgccagagtcacatgtgggcgtcgcctggcgcctgaagaac
gagatccccaactcgcacatcctggaccagtaccgtaacccgagcaatcccctggctcac
tacgacaccacagccgaagagatcctggagcagtgcgacggtaaagtggacatgttagtg
gcaggagcaggcacaggaggaaccatcacaggcatcgcccgcaaactgaaagaaagatgc
cccaacatcaaaatcgtcggtgtcgacccagagggctcaatcctcgctgagccggaggaa
attaacaagactgataaaacccagtatgaggtggagggcatcgggtacgacttcatcccc
actgtgctcgacagatcagtagttgatagctggtacaagtccaacgatgaggagtccttc
aacatgtctcgtatgctgatcagagatgagggtctgctgtgcggaggcagctctgggaca
gccatggctgctgcagtaaatgtcgccaaagaactgaaggagggtcagcgctgtgtcgtc
cttctgccagattccatccgcaactacatgtcaaagttcctgagtgacaagtggatggtc
cagaaaggcttcctgagggaggaggacctcatggtgaaaaaaccatggtggtttaaccta
aagcttcaaggcttgaacctgtccgcccccctcaccgtcctgccaactgtcacctgtcag
aagacaatcaaaatcctcaaagagaaaggcttcgaccaggcccctgtggtggatgaatct
gggttaatcctgggcatggtgacattagggaatatgttggcctctattctggctgggaag
atcaggctgtcagatccagtcagcaaagtgctctacaagcagttcaaacagatccgtctg
actgataacttgggaaagttgtcccgcatcctggaaaccgatcactttgccctggtggta
cacgaacagatccaatcaggcctcgaatactgtcaaatgctggtgccacccagtgatcta
acagacggctctcccagtctgaagcagatggtgttcggggtggtcaccgccgtcgacctg
ctcaactttgtcacaggcgtggagaggagagagcgctccctttcagagtccaccgatgaa
ctgtgctaa
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