Scomber japonicus (chub mackerel): 128354604
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Entry
128354604 CDS
T09718
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128354604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128354604
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
128354604
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
zf-C2H2_4
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
128354604
NCBI-ProteinID:
XP_053170803
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All DBs
Position
24:1645802..1664732
Genome browser
AA seq
1061 aa
AA seq
DB search
MVGCDSGEMNSEADRRQEVKLSGSLCVSEQHINNDHIHGEKKEFVCRWEECSREQKPFKA
QYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSN
ASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRSDVPPR
PPAPRENGENETGHRDRIQREDKISDSSSPRGVEDYLHVKSIKTENSVMYQSSPGGQSSC
SSEPSPLGSTTNNDSGVEMAAHSGGSLGDLSTLDELPFVESFGFDDSHGGVAAAMGLHFR
KQLSTCQHLEHLKKEKLKTVRDSCRWAANPTPLAAGTKLPPIPATGSLLESPSMGGGPVS
FPGSGFGDLSSGKMTLLGSLSERRDSTSSTLSSVYTLSRRSSGISPCYSSRRSSQASQFG
ANRPSNISSADSYDPISADISRRSSQTSQCGGSSGGSGRYGGESLTGILSLTPAQHYRLK
AKYAAATGGTPPTPLPNIDKMKSHQTYGDFQESPTSTNGLSSRQYSSYTTRSLMPHEVPS
NIPRRASDPVRRGALDPHSQPQMQRYSSMGTLSGAAQPRPPPAADRQHLSHQTFLRSDGS
LLRYPCSLRPPSITENVAMETMTNDIPEEDVMLPGDAVQRLKTENGDATNRVSTHQDFQG
NPLQQQAYYQRRMAVVDTNMNPPTLLATSRLSPGQQQQTCPSSPRGSKANVSVQWNKSSL
GPLDVSQHPSKLQVGGNLALLQQNQNFGSFQNNLSSNQQMIQNLQRYKQPNAEPGANCLQ
QQRFQQSSNLNEAISSQYMLKQGIGPYDKNGNTTYPTVVNGGLLTCKQEPVDMHFADAGF
QSVQVKIEDCEESILISDQQNCKIPSQSPLQAGNQSHLQPRPPAQPKSLNRHLPRPKIPQ
QTRHNPDATPNIPNSGVIGFHCGDSSDDNALYYTGQIQVFESNGNLDHRVVDVPPFENDA
TASSSGTSQTARTTDSNAVLEQAQIDFDSMLDDGDHSSLMSGTLSPGLLQSLSRSSSRLT
TPRNSVTLPSVPAGTGNMAIGDMSSLLSALAEESKFLNLMS
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctgtgacagcggtgagatgaactcagaggccgatcggagacaggaagtgaag
ctctcggggtctttgtgtgtttcagagcagcacatcaataacgaccacatccacggggag
aagaaggagttcgtgtgccgctgggaggaatgttccagggagcagaaacccttcaaagct
cagtacatgctggtggttcacatgcgccgacacacgggggagaaaccacacaagtgcacg
tttgaaggctgctcgaaggcatactcccgtctggagaatctcaaaactcacctccgctct
cacacgggagagaaaccgtacgtctgtgagcacgaaggctgcaacaaagctttctccaac
gcttcggaccgagccaaacaccagaaccggactcactccaacgagaagccgtacgtgtgt
aagatccccggctgtacgaagcgctacacggaccccagctctctcaggaagcacgtgaag
actgtgcacggccccgaagctcacgtcaccaagaagcagcgcagcgacgtgccgcccaga
ccgccggcgccccgagagaacggagagaacgagacgggacacagagacagaatccagaga
gaggacaagatatcagacagcagctcccctagaggagtggaggactacctgcacgtcaaa
tccatcaagacggaaaactctgtgatgtatcagtccagccctggcggtcagtcatcatgt
agcagcgaaccatcaccacttggcagtaccaccaacaatgacagtggagtagaaatggcg
gcgcacagcgggggaagcctgggggacctcagcaccttggacgaactgcccttcgtggag
tcctttggtttcgacgattcccacggtggggtcgcggcggcgatgggcctccactttcgg
aagcagctcagcacctgccagcacctggagcatctgaagaaggagaagctgaagacagtg
agggactcgtgtcgatgggccgccaacccaacaccgctggccgccggcaccaagctgcca
cccataccagcaaccgggtccctcctggaaagtccaagtatgggtggtggtcctgtgtcc
ttccctggttccggctttggtgatctgagctccggtaaaatgactctgctgggaagtctt
tcagagcgccgcgacagcacctccagcaccctgagctcagtttacaccctcagccgccgt
tcctcgggcatctccccctgctactcaagccggcgctccagtcaggcctcgcagttcggc
gctaaccgcccaagcaacatcagctccgccgactcctacgaccccatctctgccgacatc
tcgcgacgctccagccagaccagtcagtgcgggggaagcagcggaggatcaggaaggtac
ggaggagagagcctaactggcatccttagcctgacccctgcccagcactaccgcctcaaa
gctaaatacgctgctgccactgggggcaccccacctacccctctcccaaatatagacaag
atgaagtctcaccagacgtacggagacttccaggaatcccccacgtcaaccaatgggctg
tcctccaggcagtacagcagctacaccacacggagcttgatgccccatgaggtcccgtca
aacatcccccgccgagccagtgaccctgtgagacggggggctctagatcctcacagccag
ccgcagatgcaacgctacagcagcatgggaacgctgagcggagcggcgcagccccgtccg
cctcctgcagcagatcggcagcatctatctcatcaaaccttcctgcgatcagatggcagt
ctcctccgctacccttgcagcctgcgaccgccaagcattacggagaacgtcgccatggag
acgatgacaaatgacataccagaggaagacgtgatgctgccgggtgacgcggtgcagcgc
ctcaaaactgagaacggagacgcgacaaacagagtgtcgacacatcaagatttccaagga
aaccctctccagcagcaggcgtactatcagagaaggatggccgtcgtcgataccaacatg
aacccgccgactcttttagccacttcccgcctgagtccagggcagcagcaacagacgtgt
ccatcttccccaaggggcagtaaggccaacgtatccgttcagtggaacaaaagctctttg
ggacctctggacgtctcccagcacccctccaaactgcaggtcggtggaaacctggcgctc
ctccagcagaaccagaactttggatctttccagaacaatctcagctcgaaccagcagatg
attcaaaacctgcagagatacaaacagccaaacgctgaaccaggagcaaactgtctccag
cagcagagatttcagcagtcgtcaaatctcaacgaagcaattagctctcagtacatgttg
aagcaaggcatcggaccctacgataaaaacggtaacaccacttatccaacggtggtcaac
gggggcctgctaacctgcaaacaggagccagtcgacatgcactttgctgatgctggattt
cagtctgtgcaagtcaaaatcgaggactgcgaagaatcaatcctgatttcagatcagcag
aactgtaaaattccctcccagagtcctttgcaagctgggaatcagagccatctccagcca
aggcctcctgcacaacctaaatctttaaacaggcaccttccaaggccaaagattccccag
caaacaaggcacaacccagatgctactcccaacatacccaatagtggagttattggattt
cattgtggcgacagctctgacgacaacgctctgtactacacggggcagatccaagtattc
gagtccaatggaaacttggaccatcgtgtggtggatgtacctccgtttgaaaatgatgca
acagcttccagttcaggcaccagccagacggccaggaccacagactctaacgcagtgctg
gagcaggcacagatagactttgacagcatgctggatgacggggatcactccagcctcatg
tcaggcactctgagtccaggtctgctccagagcttgtcccggagttcgtcccgcctgacg
acacccaggaactcggtcacgttgccgtcggtgccggcggggacggggaacatggcgatc
ggagacatgagctccttgctgtcggctctggcagaagagagcaagttcctcaacctgatg
tcttag
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integrated database retrieval system