Scomber japonicus (chub mackerel): 128355028
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Entry
128355028 CDS
T09718
Name
(RefSeq) vitamin D3 receptor B
KO
K08539
vitamin D3 receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128355028
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128355028
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128355028
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128355028
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128355028
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128355028
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF6823
Motif
Other DBs
NCBI-GeneID:
128355028
NCBI-ProteinID:
XP_053171148
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Position
3:14556303..14585407
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AA seq
425 aa
AA seq
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MEPTVVSTSTLAPDEFDRNIPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKDEEAQREAE
REARRPRLSDEQSQVIATLVEAHHKTYDDSYSDFCRFRPPVREGPVTRSASRAASLHSLS
DASSDSFSHSPESVDTKMNFNNLLMMYQEQGSSPDSSEEEGSSFSMLPHLADLVSYSIQK
VIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFNLEDMSWSCGAPDFKYQISDV
TKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHARIEALQDRLS
ETLQAYIRLHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVF
GSEVS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacggttgtgagtacgtccactctggcccctgatgagtttgataggaacata
cctcggatctgcggcgtgtgtggtgacaaagccaccggcttccactttaacgccatgacc
tgtgagggctgcaagggttttttcaggcgcagtatgaagcgcaaggcgtccttcacatgt
ccctttaatggcagttgcaccatcaccaaggacaacaggcgccactgccaggcatgccgg
ctcaaacgctgtgtggacattggaatgatgaaagagttcattttgacagatgaggaagtg
cagaggaagaaggacctgattcagcggagaaaggatgaggaggcacagcgcgaagcggag
agggaggcacggcgaccccggctatctgatgagcagagtcaggtcatcgccacattggtg
gaggcgcaccacaaaacatatgatgactcctactctgacttctgccgctttaggcctcct
gtgcgtgaaggcccagtgacacgtagcgccagcagagctgcctctctccactctctgtct
gatgcctcctctgactccttcagtcactctccagagtcagtcgacaccaaaatgaacttc
aacaatctgctgatgatgtaccaggagcagggcagcagccctgactccagtgaggaggag
ggctccagcttctccatgttgccccacctggctgatctggtctcctatagcatccagaag
gttattggctttgccaagatgatccctgggttcagggagctgactgcagaggaccagatt
gccctgctcaagtccagcgccatagaggtgatcatgctgcgctcaaatcagagcttcaac
ctggaagacatgtcctggagctgtggtgcgcctgactttaaataccagatcagtgatgtc
actaaagcgggccacactctggagctgttagagccgctggtgaagttccaggtgggccta
aagaagctcaacctgcacgaggaggaacatgtgctgctgatggccatctgcttgctttct
ccagaccgcccaggtgtgcaggaccacgcacggatcgaagccctccaagaccggctgtca
gagaccctacaggcctacatccggcttcaccacccaggaggacgactgctctacgccaag
atgatccagaagctggccgacctgcgcagccttaacgaggagcactccaagcagtaccgc
tcactctccttccagccggagcacagcatgcagctcaccccgctggtgttggaggtgttc
ggcagcgaagtctcctag
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