Scomber japonicus (chub mackerel): 128356730
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Entry
128356730 CDS
T09718
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128356730 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128356730 (nod2)
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128356730 (nod2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
NLRC4_HD2
CARD
LRR_6
LRR_TMOD-LMOD
WHD_NOD2
LRR_CARMIL
LRR_4
AAA_16
nSTAND_NTPase5
LRR_NLRC4
AAA_29
AAA_22
Sigma54_activat
NTPase_1
AAA_30
nSTAND3
Viral_helicase1
AAA_25
T2SSE
Motif
Other DBs
NCBI-GeneID:
128356730
NCBI-ProteinID:
XP_053172825
LinkDB
All DBs
Position
1:11785651..11790408
Genome browser
AA seq
986 aa
AA seq
DB search
MFNQELVLKQRAEILHALCSSGSTEHLERVLDILLSQGELIWEEYQSIQVQGRALYTNVR
QLLDLVYTKGEDTCEFFLAAVKQVLPEAQGAGITFSGCCSNLEKTGESQCTSIQTLLTQR
ASLVTKIRACIDGALEALVESGHFTSADCDEVLLPIHTPSQKARRLLDHVRSKGESAAKV
LLHYIHESESSLNQEKWTLSKEFSKYRKKLSSSVSAQSCFLSSYGGTSHMPLDEIYTEGQ
LELANGCADLSGALDLDNIVSAAGTVNDEADTVLVSGEAGSGKSTLLQRLHLLWARGVAL
KGFLLLFPFSCRRLNSEQRELSVQELLFQHCCWPDKEQEEIFQFILDHPHLILFSFDGLD
ELKQGFSDEHRVCCPTQRAPVHILLFNLLQGSLMKGVRKVVTSRPDAVGPMLKKHLRKEV
LLKGFSPSGIDCFVKKHHRDPTVAAKVLESLQMNTALLGLCHSPVLCWIVSECHKELLGC
GEGSPQTITDVYLMILQHFLQHQSPLKSTVGLGWLQEHIKAVLHLGQLAFEGIGTSCYIF
TDTDLETCYVTEKDICMGFLILSKDMSSTHSKRYEFLHVTIQCFFAALFIVLSNNTDRST
IHKLFELQNMKGTGLSSTWFMGCIPFSDQQGQGLEGESVIAETSNLQITATFVSGLLSQR
HRNLWLHCCSSAVMEKKVRQVVKCLSKGMHKHFKSIPQPVEGEKKSMHAMPGFVWLIKCI
YEMQECKIAKDAMSKLEVDHLKLTYCNIGPVECTALAYALQYLRKPVGLQLDYNSVGDVG
VEQLLPCMHICNSLHLRNNNITDEGIRKLIAKGIQCDNFQKIALFNNKLTDACTLHFSLL
LKTKQNFLSLRLGNNNITAEGAKQLAEGLKFNHSLRYLGLWGNKISDTGAEALASALEGS
KTLVWLSLVGNGVGSAGAYALAKVIESSTSLEELWLTENCITKAGVECLIQALERNTHVK
SVWLRNNDLSWEEVEEMTRYESRLIF
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaccaggagcttgtgttgaaacaacgggcagagatactgcatgcactgtgtagc
agcggctctactgaacatctggaaagggtactggacatactcctgtcccaaggggagctc
atatgggaggagtaccagagcatacaagtacagggtagggcactgtataccaatgtcaga
cagttgctcgacctggtgtacacaaagggtgaggacacctgtgagttcttccttgctgct
gttaaacaggtcctgcctgaggcacagggagctggcatcaccttttcgggatgctgttca
aatctagaaaaaactggagaatctcaatgcacatcaatccagactcttctgacacaaaga
gcaagcctggtcactaagatacgagcctgcattgatggcgctctagaagctttggtggaa
tcaggacacttcacttcagcagactgtgatgaagtgctgttacctatacataccccctca
cagaaggcaagacgtttgcttgaccacgtcagatcaaaaggcgagtcagcagcaaaagtt
ttactacactacattcatgaatcagagtcctcactgaaccaagagaaatggaccctttcc
aaagagttctcaaaatatcggaagaagctcagcagttctgtgtctgcccagtcctgcttt
ctcagcagctatggagggaccagccacatgcctctggatgagatctacactgaaggccaa
ctggaactagcgaatggctgtgctgatctcagtggagctttagacctagacaacatagtt
agtgcagcaggtacagtgaatgatgaggcagacacggtgctagtatctggtgaggcgggg
agtgggaagagcaccctactgcagaggctccacttgctttgggctcggggggttgccctc
aaaggatttctcctactgtttccattcagctgtcgcaggttgaactcagagcagagggaa
ttatctgtccaagaactgttgtttcagcactgctgctggcctgacaaggaacaggaagag
attttccagttcatcctggaccacccacatctcatcctcttcagtttcgatggccttgat
gagctcaagcagggcttttcagatgaacacagggtttgctgccccactcagcgtgcacct
gttcatatactgttgttcaatttacttcaaggttccttaatgaagggtgtgagaaaagtg
gtgacaagtcgcccagacgcagtaggccctatgctgaagaagcaccttcgcaaagaggtc
ctcctgaaaggcttttcccctagtggcattgactgttttgtcaagaagcatcacagagac
cccacagtggcggccaaggttttggagtccctacagatgaatacagctttgcttgggctt
tgtcatagtccagtcctctgctggattgtctcagagtgccataaggagctgctgggctgt
ggagagggcagcccacaaaccataacagatgtttacttaatgatcttacagcacttcctc
cagcaccaaagccccctgaagagcaccgtggggttaggttggctacaggagcacataaaa
gcagtcttgcatctagggcagcttgcttttgaggggataggaacatcctgttacatcttt
acagacacagacctggagacttgttatgtaactgaaaaggatatctgcatgggctttctc
atcctgagcaaagatatgtcctccacccacagcaaacgatatgaattccttcatgtgact
atacagtgtttctttgctgctctgttcattgttttgtcaaacaacactgaccgctccacc
atccataagctctttgagctgcagaacatgaaggggacaggcctgagtagcacatggttc
atgggctgcatacccttcagtgaccaacaagggcagggtttggagggggagtctgtgata
gcagaaacatcaaatctgcaaatcacagccacgtttgtgtctgggctactgtcccagcgg
catcgaaatctatggttgcactgctgttccagtgctgtgatggagaagaaggtcagacag
gtggtcaaatgtctctccaaaggcatgcataaacacttcaagtctatccctcaacctgta
gagggggagaagaagagcatgcacgcaatgccaggctttgtttggcttatcaaatgcatc
tatgagatgcaggagtgcaagattgctaaagatgctatgagtaagctggaggtggaccac
ctgaaattgacctactgtaacattggccctgtagaatgcactgcactagcctatgcactg
cagtatttaaggaaacctgttggccttcagctggactacaattctgtaggcgatgtgggt
gtggagcagcttcttccttgcatgcatatttgtaattccctacacctcagaaataataac
atcacagatgaggggattcgcaaactgattgctaagggtatccagtgtgacaacttccag
aaaattgcgctcttcaacaataaactaactgatgcttgcaccctgcacttttctcttctt
ctgaagaccaagcagaattttctttctctgaggctaggcaacaacaatataacagcagaa
ggagcaaagcagctggcagaaggactgaaattcaaccattcactgcggtacttagggctt
tggggcaataagataagtgatacaggagctgaggcccttgccagtgccttagaaggaagc
aaaactctggtgtggcttagcttggttggcaatggtgtagggagtgcaggagcttatgcc
ctcgccaaagtgatcgagagcagcacgtcactggaagagctttggttgacagaaaactgc
ataaccaaggcaggggtagaatgtctgattcaagccctggaacgcaatactcatgtgaag
tcagtatggttgagaaacaatgatctcagttgggaagaggtggaggagatgacacgatat
gaatcaagactgatcttctga
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integrated database retrieval system
