Scomber japonicus (chub mackerel): 128357024
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Entry
128357024 CDS
T09718
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
sjo04144
Endocytosis
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128357024 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128357024 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128357024 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128357024 (itchb)
04121 Ubiquitin system [BR:
sjo04121
]
128357024 (itchb)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128357024 (itchb)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128357024 (itchb)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
HECT type E3
128357024 (itchb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
128357024
NCBI-ProteinID:
XP_053173215
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All DBs
Position
4:8777025..8800356
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AA seq
882 aa
AA seq
DB search
MDSEVAKAGTSNGYPMKAQLQIIVLSAKLKENKKNWFGPSPYVEVTVDGKSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDVLLGMATLDVSDTLKSNDMKISEVVQTL
QLCDRDQSDVVGDLSVCLDGMTVDPEMFALAEADHHTNGKSQPNGDYSIRRSRDSSPAVD
GVEHRPSPSGQRSAKSTGSPSVSSGSSRPLRPPRPSRPPPPTPRRPTSSPASSSNGSGPA
DASDAQSGSDTPVHSGASSAPDASPSAGSDRDSASASGSAPAATRQSTSSITPAATPRVP
AVTSGPLPPGWEQRVDQNGRMYFVDHVEKRTTWERPEPLPPGWERRVDQMGRVYFVDHVK
RTTTWQRPTMETVRNYEQWQHQRSQLQGAMQQFNQRFIFGAQEQVSATQNKEFDPLGPLP
HGWEKRTDSNGRVYFVHHPTRSTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVDHNR
RTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLAMPQHVKITVSRKTLFEDS
FQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVARQWFFLLSHEVLNPMYCLFEYAGKDNYC
LQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKHILNKPLALKDLESID
PEFYNSLMWIKDNNIEECELEMFFSVDKEILGEITTHELKPAGGDIQVTEENKEEYIRLV
AEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLSDWQRNTIYRH
YARSSKQIIWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFPDLMGSNGPQKFCIEKVGK
ENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtcgccaaggcgggcacttccaatggttaccctatgaaggcgcagcta
caaatcatcgtgctatcagcaaaactaaaagagaacaagaagaactggtttggtcccagt
ccttatgtggaagtgacagtcgacggcaaatccaagaaaacagagaagtgcaacaacacc
cacagccccaaatggaagcagccgctcactgtgatcgtgactcctttcagcaagctggtg
tttcgtgtgtggagccaccagaccctgaagtcagacgtgctgctgggcatggccacgctg
gacgtcagcgacacactcaagtctaatgatatgaaaatctctgaggtggtgcagacctta
cagctgtgtgacagagaccagtcagatgtggtgggagacctgtccgtctgcttggacggc
atgaccgtcgaccccgagatgttcgccttggcagaagcagaccatcacacaaatgggaaa
tcacaacctaatggggattattctatcaggcggagtagagacagctctccggctgtggac
ggggtggagcaccggccttctcctagcggccagagatcagcgaaaagcaccggctctccc
tcagtgtcgtcaggcagctcgcggccccttcgcccacccaggccctccagacctcctcct
ccaaccccacgcagacccacctcttcaccagcatcttccagcaacggctctggaccagct
gatgccagtgacgctcagtcgggttccgacacacccgtgcactcgggagcctcgtcggcc
ccagacgccagtccttctgcaggctcagacagggattccgcatcagcctccggctctgca
cccgcagcgaccagacagtccaccagcagcatcacgcctgctgccactcccagggtccct
gcagtcacatctggaccgctgcctcctgggtgggagcagagggtagaccagaacggcagg
atgtattttgtggatcacgtggaaaagagaacaacgtgggaacgccctgaaccgctgccc
cctggctgggaacgccgtgtcgaccagatgggacgggtctactttgttgaccacgtgaag
cggaccaccacgtggcagcgtcccacgatggagacggtccgtaactatgagcagtggcag
caccagcgcagccagctgcagggagccatgcagcagttcaaccagaggttcatattcggg
gcacaagagcaggtctcagccactcagaataaggagtttgatcctctcgggcctcttcca
catggatgggagaagagaacagactctaatggcagagtttattttgtacatcaccctaca
cggtcaacgcagtgggaggacccacgaacacaggggttgttgaatgagaaaccacttcca
gagggctgggagatgaggttcactgtagatggtattccctacttcgtcgaccacaacagg
agaaccactacctacatcgatcctcgcactggaaaatcatcacttgaaaatgggcctcag
atcacctatgttcgagacttcaaagccaaagtacagtacttcagattctggtgccagcaa
ctggcgatgcctcaacacgtcaagatcaccgtttccagaaaaacactgtttgaagactcc
ttccagcagatcatgagcttcaacgcacaggatctacgaaggagactgtggatcattttc
cccggagaagaaggcctcgactatggaggcgtcgcgaggcaatggttcttcctgttgtcc
catgaggtattgaaccccatgtactgcctgtttgaatacgccggcaaagataactactgt
ctccagatcaaccccgcctcctacatcaaccccgaccaccttaagtattttaagttcatc
ggacgcttcattgccatggctcttttccatggaaagttcatcgacacgggtttctcactg
ccattttacaagcacatcctaaacaagccactggccctcaaagacttggagtcgattgac
cctgaattctacaactccctcatgtggatcaaggataacaacatcgaggagtgtgagctg
gagatgttcttctctgtcgacaaagaaatcttgggggaaatcaccacccacgagctgaaa
ccagcaggaggagacatccaagtcactgaggagaacaaagaggagtacatcaggctggta
gcagagtggaggttgtccagaggcgtggaagagcagacacaggctttcttcgaaggcttt
aacgaggtcctcccacaacagtaccttcagtactttgatgctaaagagctggaggtgatg
ctgtgcggtatgcaggagatcgacctttcagattggcaaagaaacaccatctacagacac
tacgctcggagcagcaaacagatcatctggttctggcagttcataaaggagatggacaac
gagaagaggatgaggctgctgcagtttgtcactggtacctgtcgcctgcctgtaggcggc
ttccctgacctcatgggaagcaacggtccccagaaattctgtattgagaaggtgggaaag
gaaaactggcttcccagaagtcacacgtgcttcaacagactggacttgcccccctacaag
agttacgagcagctgaaggagaagctgatgtttgccattgaggagacggaaggtttcggg
caggagtga
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