Scomber japonicus (chub mackerel): 128357620
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Entry
128357620 CDS
T09718
Symbol
nup210
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128357620 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128357620 (nup210)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128357620 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_15th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_6th
NUP210_Ig
Big_2
Motif
Other DBs
NCBI-GeneID:
128357620
NCBI-ProteinID:
XP_053173961
LinkDB
All DBs
Position
4:22769159..22797535
Genome browser
AA seq
1868 aa
AA seq
DB search
MISLRLSVLLWLSLIITDNQVSCTSRLNIPKVLLPLARSTRINFTLETTEGCYRWFSTRP
EVASIQALDEERDKGCSKRAVLQALSTQPSRLTSIILAEDVVTGQVLRCDAIVDIISAIQ
IESTTRELHLEDSPLALRIHALDSEGNTFSTLAGLVFDWTLVKDVDVNGFSDSYNSLRVL
KFSESTYKPPGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVRLLIL
ENIMLSPAHDVYLLAGTSIRYKVLKIKQGTIAELTMPCDQYELHLQNSVVGPNGNTEIIV
ASLDQKISTVTAIQLGHINVVLDHKSLRMQGISRLPNSTLHVVEPGYLGFKIHPGDSWAL
ETGRVYDIVIEVFDKSGNKIYLSDNVRIGTGFPSEYFENLESSLNGSYHRVKALKEGLTL
INATLKAVVDENGEVHALANPVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIKATG
GSGNFSWSSSNTAVATVTVKGVMTTVSDIGVSIVYAHDLRNPLHYGQMKVYVVEPVAMDF
AQCPVEARVGHILDLPLRIFGLLEEVEMDQVMLSDCSHFDLQVEEGHRGIFQLLDGRLAP
GQDHCSGVRAKALAPGYTTLSVSYTHGNVHLSAKITIAAYLPLMAIDPVSVAVVTLGSSK
DMLFEGGPRPWILEPSKFFCSLRAEDEASVSLTLTNPSSHNYNQHWVRASCRTLGEQVLE
VTVGNRASVTNHYPAVEVAVVKFVCAPPSRLTLVPVYTSPRLDLTCPLLQQNKQVVPVSN
YRNPILDLAAFDQQGRKFDNFSSLSILWESTKESLASIEPTMPMELQLLEDGNKQMKLHG
RQTVLVHHQTGIAAIRVTALGYQISHLAAAQVPSPYDPLIPVSATLELLLVEDVKVSPDT
VTIYNHPDVRENLALKEGSGHFFVNTSVSGIADVVFQDGQGTAQVTPVRPGVVKVMVHDL
CLAFPAPAEATVHVSDILEVYVRVVDKVEIGKSVKAYVRVLDDNKKPFPASYFKFMNLKL
KAASAIVSLKHLSESAEYDSAVFLVKGATIGQTTLSAVVVDKNGKKIASAPQQIEVFPPF
KLIPGRMTLLIGAMMQITSEGGPQPQSNILFSISNEEIASVNSMGHVRGVTVGNVTVTGL
VQAVDAETGKLVVVSQDQVEVEVVYLSGIRIRAPITRMKTGTQMPVYVMGITNSQTPFSF
GNAVPGLTFHWSTTKRDILDVESRHVEANVELQSEHNFGMRVTGKTRGRTGLKVVLRVSD
PMAGQLVNNLQEFKDEIQIQVYDKLHMLNPEVEAGEILMAPNSALKLQTNRDGVGALSYQ
MLDFPDQVVIAQVDDKGLLFSGSLTGISSLLITSQEAFGVNQTLILAVKVVPMSYVRFST
SPVLYTHTRENLKAFPLGVVITFTVHFHSSTGEALHSSNSQLMFSTNRDDLVQVGIGPTN
NTLTVRTVNVGLTLLSVLDNENVGVADYVSIPVENAIHPYESHRLVVGDVICFSAHFTNQ
DGVHGTWSSSANGVLQIDPKSGAAVARDAGTATVYYDIPGTLRTYREVVVEAATKTAAVA
QATPIRNGKETKVLLTTRERGTNLIGTCSPVQTEAISQLQPETSISCHLSFTSEVVDFPA
SDVFKTHTSFDPSIGFYTCSMTLRPKTDQQTRMLSMSMTNLLVKAGLEGSAFSGEQVSTR
LPIEPGLYIDQTELLLSNLHPSAELTVFGPAAALSDMKVMSSSPIIAVHEKEVNHGFPSY
SKYTVNAVDPQAAVSASISISSTSSGQSLLIPISLIHVTDPNAATQAVPPVANMEGGHSL
HSFINSYEMMFFTLFALLAGTAITIIVFHTVFSPRXQTHHLAYIQTTSPISGSVEEQCWQ
YLLTHQIL
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgctaagattatcagtgttgctatggctatcattgataataaccgataatcaa
gttagctgtacctccagattaaatataccaaaagtgttgctaccactcgccagaagtaca
aggattaacttcacactggaaactactgaaggctgctacagatggttttccaccaggcca
gaggtagcgagcatccaagctctggatgaagagagagacaaaggctgctccaagagagct
gttctacaggctctctccacccagccatccagactcaccagcatcattctggcagaagat
gttgttacagggcaggtactacgctgtgatgccattgtggatatcatcagtgcgatccag
attgagtccaccaccagagagctacatcttgaggactcaccactggcactcagaattcat
gcactggactctgaaggaaacaccttcagcaccctcgctggtctagtgtttgactggacc
ttagtgaaagatgtagatgtgaatggattctctgattcttacaattcattacgggtactg
aagttctccgagtccacatacaaaccccctggatacatatctgaaatggagcgtgttggg
aaacagggtgatattattttggtttctggacttaaaacaggacatgctaaattaaaggcc
aaaatacaagagtcattgtataaggatgtgggtgcagcggaggtgaggctgctgattttg
gagaacataatgctgagtcctgcacatgatgtctacttgttggcgggaacttccatccga
tacaaagtcctgaagataaaacagggcacgatcgcagagctcactatgccctgtgatcag
tatgagctgcacctccagaacagtgtggttggacctaatggaaatacagaaattattgta
gccagtctggatcaaaaaatctccacagtcacagcaattcaactgggacacatcaatgtg
gtgctggaccataagagccttcgaatgcaaggaatctctcgcctccccaatagcactctg
catgtggttgaaccaggttaccttggttttaaaattcatccaggagacagctgggctctc
gaaacaggcagagtgtatgatatcgtcattgaagtattcgataaatccggcaacaaaatc
tacctctctgataatgtccgtattggcaccggttttccttcggagtactttgaaaacctg
gaatcttctctgaatggatcatatcatcgtgtcaaagcactcaaagaaggcctgactctc
attaatgctaccctgaaagctgttgtggatgaaaatggagaggtccatgcactcgccaac
ccagtccacaatgaacaggatgtggaaatctataaccctatagttcttagtcccagtatt
ctcacgtttccatggcagcccaaggtcggagcttatcagtacacaataaaggccacagga
gggagtggaaatttcagctggtcttcatcgaatacagctgtagccactgtgacggtgaaa
ggagtgatgacaacagtcagtgacattggcgtcagcatagtttatgctcatgatctccgc
aacccactacactatggacagatgaaggtgtatgttgttgagcctgtggcgatggacttc
gctcagtgcccagttgaagccagggtgggccacattctcgatctacccctcaggattttt
ggcctgctggaggaggtggagatggaccaggtcatgttgagtgactgctcccactttgac
ctgcaggttgaggaggggcaccgtggcatcttccagctgctagatgggaggctggcacca
ggccaagatcactgcagcggagtcagagccaaagccctggcccccggttacaccacgctt
tctgtcagctacacccacggcaacgttcacctcagtgccaagatcacaattgctgcttat
cttcctctcatggccattgaccctgtatctgtggcggtggtgactctgggatcatctaaa
gacatgttgttcgaaggtgggccacggccttggattttagagccctccaagttcttctgc
agcttgcgcgctgaggatgaagccagtgtgagcctcactctgaccaacccatcatctcac
aactataaccagcactgggtcagagcatcatgcaggaccctgggagagcaggtgctggag
gtgacggtggggaacagggctagtgtgaccaatcattaccctgctgtggaggtggcagtg
gtgaagtttgtatgtgctcctccgtctcgcctcacgctggtcccagtgtataccagccca
cgtctagacctgacctgtccactgctgcagcagaacaaacaagtggtgcctgtttcaaat
taccgtaaccccattttggacctggctgcttttgatcaacaaggaagaaagtttgacaac
tttagctccctgagcatattgtgggaatccaccaaggagtccctggccagtattgaaccc
acaatgcccatggagcttcagctgttagaggatggcaacaaacagatgaaacttcacgga
cgtcagacagttcttgtacaccatcagacggggattgctgccattagagtgacagctctt
ggttaccaaatttcacatctcgcagcagcccaagttcccagtccatatgacccgttgatc
ccagtctcagccactcttgaacttctgttggttgaagatgtgaaagtttctcctgataca
gtaaccatatacaaccacccagatgtgcgggagaatctggccctgaaagagggttcaggg
cacttttttgtcaataccagtgttagcgggatagcagacgtggtgttccaggatggccaa
ggaacagctcaggttactccggtgcgcccaggtgtggtgaaggtgatggttcatgatctt
tgtctggcatttccagcacctgccgaagccacagtacacgtttctgacatcctggaggtc
tacgtgagagtggttgacaaggtggagattggcaaatctgtgaaagcttatgtcagagtc
ttggacgataacaagaagccgttccctgccagctactttaaattcatgaatctaaaactc
aaggctgcttctgcaatagtctctctaaaacatttatcggagtccgcagaatatgattct
gcagttttcctggtgaaaggtgccacaattggtcagaccactctgtcagctgttgttgtt
gataaaaatgggaaaaaaattgcatctgcccctcaacaaattgaggtatttccaccattc
aaactcatcccaggaagaatgactctgttaattggagcaatgatgcagatcacatctgag
gggggtcctcagcctcaatccaacatccttttttccatttccaatgaggagatcgcctct
gttaacagcatgggtcacgtcagaggtgttactgttggtaatgtcactgtgactggactg
gtccaagctgttgatgctgagactgggaagctagttgttgtgtctcaggatcaagtggaa
gttgaggttgtgtatttgtcaggcattcgaatcagagcgcctatcacaagaatgaagaca
gggacacagatgcctgtatatgtgatgggaatcaccaatagtcaaacacccttctccttt
ggcaatgctgtacctggtctgaccttccactggtccaccaccaagagagacatcctggat
gttgagtcaagacacgttgaggctaacgtggagctccagtcagagcacaattttggcatg
agggtaactggaaagacaagagggcggacaggactcaaagtggtgctcagagttagtgac
cccatggctggacagctagtgaacaatctgcaggagttcaaagatgaaattcagatccag
gtctatgacaagctgcacatgcttaatcccgaagtagaggctggggagatactgatggct
ccgaactcagccctgaaactccaaactaacagggatggtgttggtgcactctcctaccag
atgctggattttcctgaccaggttgttatcgctcaagtagatgataagggcctcctattc
tctggctctctcactggaatctcttctctgctgatcacctcgcaagaagcctttggtgtc
aatcaaactctcatccttgctgtgaaggtggtgcctatgtcttatgtgcgcttcagtacc
agtccagtgctctacacacacaccagagagaacctgaaagccttcccactgggcgtagtg
atcacattcactgtccactttcactccagcaccggagaggctctacacagctccaactcc
cagctcatgttttccactaacagagatgacctggtgcaggtggggattgggcctactaac
aatactttgacagtgaggacagtcaacgtaggcctcactcttctttcggtgttggacaat
gaaaacgtgggcgtggcagactatgtttcaatacctgtggagaacgctatccacccatat
gaaagccacagactggtggtgggagacgtgatctgcttctctgcgcatttcaccaaccaa
gatggtgttcatggtacttggagctcttctgctaatggcgtgcttcagattgaccctaaa
agtggcgctgctgtagccagagatgctgggactgctactgtgtattatgacatacctggt
acattgagaacatacagagaggtggtagtggaagcagcaacaaaaacagcagctgtggcg
caggctactccaatcaggaatggcaaagaaaccaaagtcctactcactaccagagaaaga
ggaaccaacctcatcggaacctgctctcccgtccagactgaagctatttctcagttgcag
ccagaaacgtctatcagctgccatctcagcttcaccagtgaagttgttgattttcctgct
agtgacgtcttcaaaacacacaccagctttgaccccagcattggcttctacacatgttcc
atgaccttgcggccaaagactgaccagcagactcgtatgctcagcatgtctatgaccaac
ctgctggtgaaggcaggcctggagggcagtgccttctctggggaacaggtcagcacccgg
ctgcccatagagccaggactttacatcgaccagactgagctgctgctctcaaacctgcac
ccatctgctgagctcacagtctttggcccagctgctgccctgtccgacatgaaggtcatg
tcatcttctcctatcattgccgtccacgagaaggaggtaaaccacggcttccccagttac
tcaaagtacactgtcaacgctgtggaccctcaggcagcagtttctgcttctatttccata
agcagcacttcctctggccagagcctactcatccccatctctttgattcacgtgactgat
cccaacgccgccacgcaagctgttcctccagttgctaacatggagggggggcactccctg
cacagctttataaacagctacgagatgatgttcttcaccctgttcgcgctgctagctggc
acagcgatcaccatcatcgtctttcacacagtgttctctccaaggtaacaaacccatcac
cttgcttacatccagactacatcacccatctcagggtcagttgaggaacagtgctggcag
tatttgctgacccatcagattctgtga
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integrated database retrieval system
