Scomber japonicus (chub mackerel): 128357858
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Entry
128357858 CDS
T09718
Name
(RefSeq) vitamin D3 receptor A
KO
K08539
vitamin D3 receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128357858
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357858
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128357858
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128357858
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128357858
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128357858
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
ArsA_ATPase
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
128357858
NCBI-ProteinID:
XP_053174228
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Position
4:complement(8650864..8722592)
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AA seq
420 aa
AA seq
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MEPMTVTTSVVGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKKEMILKRKEEEAAREAM
RPRLNDEQARIISSLVEAHHKTYDASYSDFSRFRPPVREGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKMNFSNLLMMYQDGASSPDSSEEDTKLSMLPHLADLVSYSIQKVIGFA
KMIPGFRELTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCINDVTKAGH
TLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHARIEQLQDRLSEALQA
YIRVNHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgacggtgacgacgtcggtggtcggaccggacgagttcgaccgcaacgcc
ccgcggatctgtggcgtgtgcggcgacaaggccaccggcttccacttcaacgccatgacc
tgcgagggctgcaaggggttcttcaggcgcagtatgaagcgtaaagcctccttcacctgc
ccatttaacggaagctgcaccatcaccaaggacaaccggcgtcactgccaggcctgtcgt
ctcaaacgctgcattgacatcggcatgatgaaagagttcatcctgacagatgaggaggtt
cagagaaagaaagaaatgatattgaagaggaaggaggaggaggcagccagggaggcgatg
aggccgcggctgaatgatgagcaggctcgcatcatctccagcctggtggaagctcaccac
aagacctacgatgcctcctattctgacttctctcgcttcaggcctccagtgcgtgaaggc
ccagtaacacgcagtgccagcagagccgcctcccttcactctttgtctgatgcctcctct
gactcattcaaccactcacctgagtcggtggacaccaagatgaacttcagcaacctgtta
atgatgtaccaggatggcgctagtagtccagactctagtgaggaggacacaaagctttcc
atgctgccccacctggctgacttggtttcctacagcattcagaaagtcataggctttgcc
aagatgatccccggcttcagagagctgacagcagaagatcagatcgccctgctcaagtcg
agcgccatcgagatcatcatgctgcgttccaaccagtcgttcagtctggaggacatgtcc
tggagctgcggaggacctgacttcaaatactgcatcaatgacgttacgaaggctggtcac
actttggagctgctggagccactggtgaagttccaggttggtctcaagaaactcaacctg
cacgaggaagaacacgtactgctcatggccatctgcctgctctccccagatcgtcccggc
gtccaagaccacgcccgcatcgagcagcttcaggaccgtctgtcggaggcgctgcaggcc
tacatccgagtcaaccatccgggcggacgcctcctctacgccaagatgatccagaagctg
gccgacctgcgcagcctgaacgaggagcactccaagcagtaccgctcgctctccttccag
ccggagcacagcatgcagctcaccccgctggttttggaagtgttcggcagcgaggtgtca
tag
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