Scomber japonicus (chub mackerel): 128358710
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Entry
128358710 CDS
T09718
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128358710 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128358710 (mmp2)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
128358710 (mmp2)
Peptidases and inhibitors [BR:
sjo01002
]
Metallo peptidases
Family M10
128358710 (mmp2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
128358710
NCBI-ProteinID:
XP_053175048
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All DBs
Position
1:13011385..13025874
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AA seq
658 aa
AA seq
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MGFPTIFSCRRIVLKVFLVQFIAFQATYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDISYRILGYTPDLDEEVINDAFFRAFKVWSDVTPLTFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGEGQVVKAKFGNADGEFCRFPFLF
MGTEYNSCTSQGRDDGFLWCSTSYNFDEDGKYGFCPHELLFTLGGNGDGAPCKFPFNFQG
EKYDGCTTQGRDDGYRWCATTEDYDRDKSFGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTSSGRSDGKMWCASTKNYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDTGA
LMAPIYTFTKDFRLSQDDIKGIQELYGTQTGKPVPPTQGPVTPMDICKEPVVFDAVAQIR
GETFFFKDRFLFRSVNFRSKPSGPLLVATYWPDLPAKIDAVYENPVDEKTVFFAGNEIWI
YKGDNLERGYPKRLSSLDLPTDLQQIDAAFNFRKNSKTYLFSGDKFWRYDENAQRMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYSYFFKGNHYFKLEDRSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagttgtcgtcggattgttctcaaagtgtttttggttcaa
ttcatcgcctttcaggcaacatatgctgccccttcgcctattatcaggtttcctggagac
gatactacacccaaaacagacaaagaagttgccttgcactatctgaacaagttttatgga
tgcccacaagacagatgtaacctcatggtgcttaaggacaccttaaagaaaatgcaaaag
ttcttctccctccaagaaactggagagattgatgccaaaacagtggatatcatgaaaaaa
ccccgttgtggtgtcccagatgtggccaattacaacttcttccacaggaaacccatgtgg
cagaaaaaagatatcagctacagaatcctgggatatactcctgatctagatgaggaggtc
ataaatgatgctttcttcagagccttcaaagtgtggagtgatgtcaccccactcacattc
acccgccttatggatggagaggctgacatcatgataaattttggccgcaatgagcatgga
gatggttaccccttcgatggtaaagacggcctcttggctcatgcttttgctcccgggcca
ggaattgggggagactcccattttgatgatgatgagcagtggacgctgggagaaggccaa
gtggtgaaggcaaagttcggcaatgctgatggagagttctgtagattccccttccttttc
atgggcactgagtacaacagctgtacatctcagggccgtgacgacggcttcctgtggtgc
tccacctcttacaactttgatgaagatggcaaatatggcttctgtccccatgagttactc
tttaccctgggtggaaatggcgatggtgctccatgtaaattccccttcaactttcaggga
gaaaagtatgatggatgcaccactcagggcagggatgatgggtatcgctggtgtgccact
acagaggactatgaccgtgacaaatcatttggcttctgccctgagactgccatgtcaaca
gttggaggaaattcagagggaagtccctgtgtcttccccttcaccttcctgggagatacg
tacgattcctgtacttcatctggacgcagtgatggcaagatgtggtgtgcctccactaag
aattacgatgatgaccgcaagtggggtttctgccctgaccaaggctacagtttgttcctg
gttgcagcccatgagtttggtcatgcccttggcttggagcactctcaggacaccggagca
ttgatggcccccatttataccttcactaaagacttcagactttctcaggatgacatcaaa
ggcatccaggagctctatggtacgcaaacaggcaaacctgtgcctccaacacagggaccc
gtcactcccatggacatctgcaaagagccagttgtctttgatgctgtagcacagatcaga
ggagagactttcttcttcaaggacaggttcctgttcaggtcagtcaacttcagaagcaag
cccagtggacctttactagtggccacctactggcctgacctgcctgccaagatagatgct
gtctatgaaaatccagtggatgaaaaaacagtctttttcgcaggcaacgagatctggatc
tacaaaggagataacttggagagaggctaccccaagaggctatccagccttgacctcccc
accgacctgcagcaaatcgacgctgccttcaactttagaaagaacagcaagacatacttg
ttttctggggacaaattctggagatacgatgaaaatgcacagagaatggaccctggcttc
cccaaacttattgctgattcctggaatggcatcccagatggcattgactctgccttcagt
ctcaatggaattgattacagctacttcttcaaaggcaaccactatttcaaacttgaggac
aggagtttgaagattgtcaagttgggtgaaatcacaaaggactggcttggttgctga
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