Scomber japonicus (chub mackerel): 128358759
Help
Entry
128358759 CDS
T09718
Symbol
rxylt1
Name
(RefSeq) ribitol-5-phosphate xylosyltransferase 1
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00515
Mannose type O-glycan biosynthesis
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
128358759 (rxylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128358759 (rxylt1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
128358759 (rxylt1)
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128358759 (rxylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
128358759
NCBI-ProteinID:
XP_053175119
LinkDB
All DBs
Position
5:24790504..24794912
Genome browser
AA seq
441 aa
AA seq
DB search
MKIPKRKLFLLIIFAYVAFSLYAAYNVFFSTKVISRVHRVVKKESAAHPGGVRGGGAAPF
LAEDWNPWEDEQVDYNSALNKRREAFKQHLGQVNNNKPKRYKVQIWGKAAIGLYLWEHIL
EAPLNPSDKIAQWREGELQSEKIDFSFYTGPAVVQGHVPLDMNSLVLVLNGREQQKVSYS
IRWLEHVHTLVQSHTVSHVAVVMLGNEHCNNDWIGPYLKRNGGFVDLLFLVYDSPWVNDK
DVFQWPLGVATYRQFPMIRPNAHMITSNRPYLCNFLGTVYKNSSREILMQVLKQSGLDKE
CITTAREKWLPQETAESLRQYQTALAQSELTLCPVGINTECYRIYEACSYGSVPVVEDVQ
TPGTCAAGPNSPLRLLKAAGAPFIFISDWKELPAILERERGVSQEQRVDRRRRLLEWYAS
FRQQMKERFTEVIEETFFKNG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccaaaaagaaagctgttccttcttatcatttttgcttatgttgcattttca
ctgtacgctgcatacaatgtgttcttcagtactaaagtaatctctcgcgtccaccgggtg
gttaagaaagagtccgcagcacacccaggcggtgtgagaggcggcggtgctgctccgttt
ttagcagaggattggaatccgtgggaggacgaacaggtggactacaactctgccctgaac
aaaaggagagaggcctttaaacagcacctgggccaagttaacaataacaaaccaaaaaga
tataaggtccaaatctgggggaaagctgccatagggctttacctttgggaacatatttta
gaggcacccctcaacccctctgacaagatagcacaatggagagagggggagctgcagtca
gaaaaaatagatttcagtttctacactggtcctgcagtggtccagggccacgtccctctg
gatatgaacagcctggttctggttctgaatggccgcgagcagcagaaggtgtcgtactcc
atccggtggttggagcatgtacacactctggtacagtctcacactgtgtctcatgtggcc
gtggtcatgctgggcaacgagcactgcaacaacgactggatcgggccgtacttaaagaga
aacggtggctttgtggatctgctgttcctggtgtacgacagcccctgggtcaatgacaaa
gatgtcttccagtggcccctcggtgtcgccacatacagacagtttcccatgatcaggcct
aatgctcatatgatcacttccaacagaccatacctctgcaatttcctaggaactgtttac
aaaaattcctccagagaaatactcatgcaggtgctgaaacagtctggcctggataaggaa
tgcatcaccactgccagggagaagtggctccctcaagagacagcagagagtctgagacaa
tatcaaacagctctggcccagagcgaactcacactctgcccagtcgggatcaacacagaa
tgttaccgtatctacgaggcatgctcttacggctcggtacccgtggtggaagatgtacag
acacctggcacctgtgcggcagggcccaactccccactacgtctcctcaaagccgcagga
gcacccttcatcttcatcagcgactggaaggaactgccggccatcttggagagggagaga
ggggtgagccaggagcagcgtgtggacagaaggagaaggctgctggagtggtacgccagc
ttccgtcagcagatgaaagagaggttcactgaggtcatcgaggaaaccttttttaaaaac
ggctga
DBGET
integrated database retrieval system
