Scomber japonicus (chub mackerel): 128359234
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Entry
128359234 CDS
T09718
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128359234 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128359234 (bdnf)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Growth factors (RTK binding)
128359234 (bdnf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
128359234
NCBI-ProteinID:
XP_053175665
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Position
1:24949958..24950782
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AA seq
269 aa
AA seq
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MTILFLTMVISYFSCMRAAPLRDAPGMRGHRTEGYLGAAATAARGHGTPQSGGGPGQRGE
LPSLTDTFEQVIEELLEVEGEAAQLGQGADKSQGGGGPSSVVTTETKDVDLYDSRVMISN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAIE
MSGQPVTVMEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRAL
TMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgcgccc
ctgagagacgccccgggcatgcggggccatcggacggaaggctacttgggcgctgctgcg
acagccgcacgaggccatgggactccacagagtggtggtgggccaggccagcgcggggaa
ctgccctcactcacagacacgtttgagcaggtgatagaagagctgttggaggtggaggga
gaggcggcacagctgggacagggggctgataagagccagggaggtgggggcccatcctct
gtggtcaccacggagaccaaggatgtcgacctgtacgactcgcgggtgatgatcagcaac
caagtgcctttggagccgccgttgctctttcttctggaggaatacaaaaactatctggat
gccgctaatatgtccatgagggtgcggcgacactccgatccctcacggcgtggagagctc
agtgtgtgtgacagtattagccagtgggtgacagctgtggataaaaagacggcaatagaa
atgtctgggcagccagttaccgtcatggaaaaggtgcctgtcccgaatggccagctgaag
caatacttttatgagaccaaatgcaaccccatggggtacacaaaggagggctgcagagga
atagacaagcggcattataattcccaatgcaggacaacccagtcctacgtgcgagcgctc
accatggatagcaaaaagaagattggctggcggtttataaggatagacacttcatgtgta
tgcacattgaccattaaaagagggagatag
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