Scomber japonicus (chub mackerel): 128359449
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Entry
128359449 CDS
T09718
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56
KO
K25425
leucine-rich repeat-containing protein 56
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128359449 (lrrc56)
04812 Cytoskeleton proteins [BR:
sjo04812
]
128359449 (lrrc56)
Cilium and associated proteins [BR:
sjo03037
]
Motile cilia and associated proteins
Dynein assembly factors
128359449 (lrrc56)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
128359449 (lrrc56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_14
LRR_8
TUSC1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128359449
NCBI-ProteinID:
XP_053175918
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Position
5:complement(23102465..23111200)
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AA seq
611 aa
AA seq
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MSSYHGSVPQEIRPGTARVLVTELSGSGNINPTPAMKPCEDSDTAVELYLSPQKLKSLCG
TSDLSQVTSLEICVDTQENTLGNFGAYLPKLVQLKMNNSTILSVRDLGTTLFHLQVLWMS
RCCLQDLDGISTLSSLKELYLAYNSVSDLSQVGMLENLQLLDLEGNDVDDLVQVQYLGLC
NKLRTLTLGGNPVCIRPNPTATQMTDYSYRAAVRELVPQLSYLDDVRVEEDGLGSSSNMG
EDWAILRNSIRDCKSSQAATEDEETADSACPYSRPSSARRPASSILPLSSAGSRPLTGSR
PMSVTRPGVLSPSGSRPGSADSDLAAVEADTSILTHGAGKILFCGNPVQAIRARREKLRT
APTRSTFTPRDLPIHVPEHTYDLEETNVKERSDLFAELRAWREQHSRRLQEIKRERLPQV
LAIQHNDDEDGEEEDDEEEGFDLNRETLSPDVARLSLSPDTTLSPSPPLSATAASGNRKL
PGIRARRLRVSQSTSERLPYSSSVVRPPGICTSTADADLTLKSVQQVKRTKVPLLPSPAH
TPRPPTTMEGGVHMDSCEKMDVLNVKADNKHQMSKLLDRPAITRPHTARAALQKHHQHSI
FQPCRESSHPD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctatcatgggtctgtgccccaagaaatccgacctggtacagcacgggtcctg
gtgactgagctgagtggatcaggcaacatcaacccaactcctgccatgaaaccctgtgaa
gactctgacactgcagtggagctttacctctctccacaaaagctgaaatcactgtgtgga
acttcagacctctctcaggtgacctcactggaaatctgcgtagacacacaagaaaacaca
ctgggtaactttggtgcctacttgcccaagctggtgcagctcaaaatgaacaacagcacg
atcttgtcagtaagagacctgggaaccaccctgttccacctgcaggtgttgtggatgtct
cgctgctgcctacaagacctagatggcatttcgactctctcctctctcaaggagttgtac
ttggcctataacagtgtgtcagacctgagtcaggttggcatgctggagaacctgcagctg
ttagatctggagggaaatgatgttgacgacctggtccaggttcagtatctggggttgtgt
aacaaactccggaccctcaccctggggggcaaccctgtgtgtatacgcccaaatcccact
gcaacccagatgactgactatagttatcgggctgcagtgagggagttggtccctcagcta
agttacctagacgatgtaagggtggaggaagatgggctgggctccagcagcaacatggga
gaagactgggccattctccgaaactccatccgagactgcaaatcatctcaggctgctact
gaagacgaggagacagcagacagtgcatgtccttatagcagacccagctctgccagacgc
cctgcttccagcatcttgcccctctcatcagcaggatccagacccctcactggctccaga
cccatgtcagtgaccaggcctggagttctctccccttctggatccagacctggctctgca
gactcagacttagcagcagtggaagcagacaccagcatcttgacccatggggccggcaag
atcctgttctgtggaaaccctgtccaggctattcgagcaaggcgagaaaagttgaggacg
gcacccaccaggtctactttcacaccccgtgacctgcccatccatgtaccagaacacaca
tatgaccttgaggagactaatgtgaaagagcgtagtgatttgtttgctgagcttagagct
tggagggagcagcacagcaggcgtctccaggaaataaagagagaaagattaccgcaagta
ctggctattcagcataatgatgacgaagatggtgaggaagaggatgatgaagaagaaggt
tttgaccttaacagagaaaccttatcccctgatgtggctcgactgtccttgtctccagac
accacactttccccttctccccctctcagtgccacagcagcttctggtaatcggaagctg
cccggaatccgtgcacggaggcttcgagtcagccagtccacttcagaacgcttgccttat
tccagcagtgtagtgcgcccccctgggatttgtacaagtacagcagacgcagacctgaca
ctcaagagtgtccagcaggtgaagaggaccaaagtgcctctactaccatcacctgcacat
acacctcgcccacctacaaccatggagggtggagtgcacatggattcatgtgagaagatg
gacgtacttaatgtaaaggctgacaacaagcatcagatgtctaaactcctggacagacca
gcaattactcgccctcacacagccagggcagctctacagaaacatcaccagcactccatt
ttccaaccctgcagagagagttcacacccagactga
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