Scomber japonicus (chub mackerel): 128360444
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Entry
128360444 CDS
T09718
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5
KO
K09337
cone-rod homeobox protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128360444 (otx5)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128360444 (otx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
DUF5930
Motif
Other DBs
NCBI-GeneID:
128360444
NCBI-ProteinID:
XP_053176853
LinkDB
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Position
6:complement(10061008..10063435)
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AA seq
296 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHTAGVGYPNTPRKQRRERTTFTRAQLDILEALFAK
TRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQSKPRPPKKKSSPTREA
NTEASANPTNGPYSPPPPPPGTAITPSSSAASATVSIWSPASISPLPDPLSASTTPCMQR
TTTYPMTYTQAPAYSQSYAGSSSYFTGLDCSSYLSPMHPQLSGTGGALSPITASSMGGPL
SQSPASLSSQGYTAASLGFGAVDCLDYKDQAAWKLNFNATDCLDYKDQNSWKFQVL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattacgccgtgaacgggttaacgctgtccggcccg
ggcatggatctgctccacaccgctggcgttggatatcccaataccccacgtaaacagcgt
cgggagcgcaccaccttcacgcgtgcacagctggatatcctggaggctctgtttgccaaa
actcgctacccagacatcttcatgagggaggaggtggccctcaagattaacctgcccgag
tcccgagttcaggtgtggttcaagaaccgtcgtgccaagtgccgccagcagcagcagcag
agcacaggccagtccaaaccacggccccctaaaaagaagtcatctcctactcgtgaggcc
aacactgaggccagtgccaaccccaccaatggaccctacagcccaccaccccctcctcca
ggcaccgccatcacccccagctctagtgctgcaagcgcaacagtgtccatctggagccca
gcctccatctctccgctgccagaccccctgtctgcctccaccaccccctgtatgcagcgc
accaccacctaccccatgacctacacccaggccccagcctacagccagagctacgcaggc
tcctcgtcctacttcactggcctggactgtagctcctacctgtcacccatgcacccgcag
ctgtcaggaactggaggcgccctgagtcccatcacagcctcctcaatgggtggacccctc
agccagtccccagcctcgctctcctcccaaggctacacagctgcctcgctgggcttcgga
gctgtcgactgtctagactacaaggaccaagctgcctggaagctcaatttcaatgccact
gactgtctggactacaaagaccagaactcctggaagttccaggtcttgtaa
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