Scomber japonicus (chub mackerel): 128362569
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Entry
128362569 CDS
T09718
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128362569
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Protocadherins
128362569
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
128362569
NCBI-ProteinID:
XP_053179334
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Position
8:16716429..16718894
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AA seq
821 aa
AA seq
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MTKRMGYRDWRWQALWWHHFFLLWTTIDGQTRYSIPEELEQGSVVGNLAKDLGLGLSEIF
DRKLRVASEAGKQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVIENPLQLHRIE
VEIRDVNDNAPSFLKSDHIIEIAESTVVGVRFPLESAEDPDVGSNGLKTYTLSKDDCFTL
KVKEIENGRKIPELVLNKSLDREKKAIHNLVLTAMDGGNPVKSGTSKITITVLDNNDNVP
LFENTFYKIAVKENSPNGSFVITTKATDTDEGPNGEIEYSLGIHTPPSVLSLFHIDAVTG
DIFLKKQLDHESQTSYRIDISARDKGLPKMEGHCSVQVDVLDINDNAPEIVLTSKPNAVP
EDSPSGTVVALLSVRDLDSGDNSKVRLQLPKGSPFDLKPSFSNNYALVTSGRLDRERFSE
YNIEITATDSGSPPLSSKNIIPVSISDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNQYTGEVRTKRPVSEQDDSSQRLLIEVKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKTMEPNKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtggcatcatttc
tttctcttgtggactacaatagacggacagactcgttacagcatcccggaggagctggaa
caggggtctgtggtaggaaatctagccaaagatctgggtttgggactatcagagattttt
gaccgtaagcttcgtgtcgcctctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtaaatgacagaatagacagagaggctttatgtggacaaagcgcc
agctgtgttctacctctgcaggttgtaatagaaaacccgttacagttacaccgaattgag
gttgaaataagagacgttaatgacaatgctcctagttttctcaaaagcgaccatataata
gaaatcgctgaatccaccgttgtaggtgtgcgttttcccttagagagtgcagaggaccct
gatgttgggagtaacggattaaagacgtacacgctcagcaaagatgattgctttacttta
aaggttaaagaaattgaaaatggaagaaaaattccagaattggtattaaataaatcatta
gatcgcgagaaaaaagccattcacaatttagttcttacagctatggacggtggcaatcca
gtcaagtctggaacttctaaaataactatcactgtgcttgataataacgacaatgtgcca
ttgtttgaaaatacgttttataaaattgctgttaaagaaaacagtccaaacggctctttt
gtaattacaacaaaagcaaccgacacagatgagggtccaaatggtgagattgagtactct
ctgggcattcacacaccaccatcagtactttcattgtttcatatagatgctgtaacggga
gatatatttttaaaaaaacaactggaccacgaatcacaaacctcatatcgaatagatatt
agtgcaagagataagggtttaccaaaaatggaaggtcattgtagtgtgcaggtggatgtc
ttagacataaatgataatgctccagaaattgtactaacttcaaaaccaaatgctgtgccc
gaagactcccccagtgggacagtagtcgctttgcttagcgtccgtgatcttgattccggc
gataacagtaaagtgaggttacagcttcccaaaggttcaccctttgatcttaaaccctca
ttttctaataattacgcactggtcactagtggtcgtttagaccgagagagattttcagag
tataatattgagataacagccactgattcaggctctcctcctctgtccagtaagaatatt
atacctgtcagcatctctgatgtgaatgataaccctcctgtattcactcagccctcctat
aatgtgtatttaaaagagaatggggtaccaggctctatactgtactcagtatcagcatct
gacctggattttggtgaaaacgctaaaatctcttactctatactggactctaaagtgcag
gacgtttctgtctcgtcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggaccag
ggctctccgtctctcagcagcaacgctactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgtcatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctctgctaaaccgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggctgaggccacagacgcctctctgttc
acagttaatcagtacacaggggaggtgaggactaaacgccctgtgtccgagcaggacgac
tcctctcagaggctgcttatagaggtcaaggacgacggggaaccggtccagtccgccaca
gtcacggtgtccatcctgctggaggacggcctccatgagcccatcttggacctccgacag
aaaacgatggagccgaataagaaaaccgggagaatcaccctttatttaattctctctctg
gcctcggtgtccgtgctgtctctggtgacgtttctcattttagcggttaaatgcatcagg
agcagcagaagcagcggtagttgctgcatgagacggagcgactgtgatgattacaagaac
cccaacagaaacctacagattcagctcaacactgatgggcctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtca
gagtacagtgatttcactttgattaaacccagcagcaccactgactttaaggaggtgatc
agtgttcttgatgcttctttacctgacagcacctggacctttgagagccagcaggtgagc
agataa
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