KEGG   Scomber japonicus (chub mackerel): 128362945
Entry
128362945         CDS       T09718                                 
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
  KO
K04725  E3 ubiquitin-protein ligase XIAP [EC:2.3.2.27]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04120  Ubiquitin mediated proteolysis
sjo04210  Apoptosis
sjo04217  Necroptosis
sjo04510  Focal adhesion
sjo04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128362945 (xiap)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    128362945 (xiap)
   04217 Necroptosis
    128362945 (xiap)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128362945 (xiap)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    128362945 (xiap)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sjo01002]
    128362945 (xiap)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128362945 (xiap)
   03029 Mitochondrial biogenesis [BR:sjo03029]
    128362945 (xiap)
Enzymes [BR:sjo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128362945 (xiap)
Peptidases and inhibitors [BR:sjo01002]
 Peptidase inhibitors
  Family I32: IAP family
   128362945 (xiap)
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128362945 (xiap)
Mitochondrial biogenesis [BR:sjo03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    128362945 (xiap)
SSDB
Motif
Pfam: BIR zf-C3HC4_3 Prok-RING_4 UBA_BIRC2-3
Other DBs
NCBI-GeneID: 128362945
NCBI-ProteinID: XP_053179790
LinkDB
Position
8:complement(10522733..10527845)
AA seq 462 aa
MSDLRQDGDLDTDHAEDFSLINSRLDSFRGSGLAQQVSAERLARAGFYFTGHADRVCCFS
CKKTVENWCRGDTPVERHKEVSPSCRFLSCTHRTNLNNTLTNGTTYNEEAEDMEYRLRTG
EVVDESTYPMVPHMRSEEARRQTFSSWPFTAPVRPRDLAEAGLYYSGESDRVQCFCCGGM
LGGWEAGDTAWGEHTKHFPHCFFILGHDVGNIPFQGGTEEEEGSRRRGASSHVHMGSYEE
RFGSFAGVQHPIDHETLARAGFYSTGTGDRVLCFCCGGGVKSWQPEEDPWEEHAKHYPGC
RFLLAEKGQEFVNRIQLQGPRRNGATSSHQNGFSGDRNEVLRSAMAQKAIERGLDPSVVE
KTILEKISRTGTSYSTLEALMEDCNNNMPKSDAMTTEQDEDPLAELRMLQREKQCKVCMD
RDICIVFIPCGHLVTCRECSESLSKCPICCGAITQKIKTYAT
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtctgatctcagacaagacggtgacttagacacagaccatgcggaggatttctccctg
ataaacagtcgcctggactcgttccgtggctctggtctggcccagcaggtgtcagctgaa
cgattggcccgggccggcttctacttcaccggccatgccgaccgtgtttgctgtttcagc
tgtaagaagacagtggaaaactggtgcaggggagacacacctgtagagagacataaagag
gtttccccgtcatgcaggtttctaagctgcacgcaccgtaccaatttgaataacacactg
actaatggtaccacatataatgaagaagcagaagacatggaatatcgtttgagaacagga
gaggttgtcgatgagtccacctacccaatggttcctcacatgaggagtgaggaggcccgg
cgtcagaccttctcttcttggccctttactgctcctgtgagacccagagatctagccgaa
gccggcctctactattcaggagagagcgaccgggtgcaatgtttttgctgcggtggcatg
ctgggtggctgggaagcaggggataccgcttggggagaacacaccaaacatttcccccac
tgcttcttcatccttggccacgatgtgggcaacatcccatttcaggggggtacagaggag
gaggagggaagcagaagacgaggcgcaagctctcatgtccatatggggagttatgaagag
aggtttggtagctttgcaggtgtccagcatcctattgaccatgagacgcttgccagggct
ggcttctacagcacagggacaggagacagggttttatgtttctgctgtggtggaggtgta
aaaagctggcaacctgaggaagacccatgggaagaacatgccaaacactaccctggatgc
agattcttgttagcggaaaaaggacaagaatttgtcaaccgcatccagctacagggccca
cgacgaaatggagctacttcaagtcatcagaatggattttcaggagatagaaatgaggtg
ctgcggtctgccatggctcagaaggccatagagaggggtctggatcccagtgtggtggag
aagaccatcttggagaagatcagcaggacgggcacaagctactccaccctggaagcactt
atggaggattgcaataacaacatgccaaagagcgatgccatgacaacggagcaagacgag
gacccactggcggaactacgaatgctgcagagggaaaaacagtgtaaagtatgtatggac
agagatatttgcattgtcttcatcccatgtggtcatctggtcacttgtagggagtgttca
gaatcactcagcaagtgtccaatctgctgtggagccataacacagaagatcaagacttat
gcgacttaa

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