Scomber japonicus (chub mackerel): 128363411
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Entry
128363411 CDS
T09718
Symbol
kdrl
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128363411 (kdrl)
04020 Calcium signaling pathway
128363411 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128363411 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128363411 (kdrl)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128363411 (kdrl)
Protein kinases [BR:
sjo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
128363411 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_VEGFR-1-like_5th
ig
Ig_2
VEGFR-2_TMD
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128363411
NCBI-ProteinID:
XP_053180386
LinkDB
All DBs
Position
8:complement(19827102..19869798)
Genome browser
AA seq
1309 aa
AA seq
DB search
MMIPSDCLKLAIVLCCSSLTNGHSEREHHLPRIQPPENPIILHKGDSLNLMCRGHGQLNW
TFQSVSPEEEMKEQQCDSRRHPRLRCSKLHIAHLRANHTGMYSCKDGSNHVTRTYIYVKD
PEQPFVEPHDSTPHILSIFRHETKLIIPCRTSDPDTQVELLAIPSLGENIVKEKKWDPKV
GFKIPYGPSAVYNIITCVTMAHGRQFKSMYIPRRRTIHLENVKITPGNVTLLVGDTLMLN
CTGDTSYNGRINFTWDFPGIKENRHFTNKTRDNPAQVFTMSKALVLPNITMENKGFYYCN
AEIEPKKYKTVVANVMVYEHPFLNISYKQDRHSTVTVKEGKRKFVFEPMVNALPKPDIKT
WSKDGVPIEKNSTCYKMKDFNLIITDLQQKHAGVYTISLGNQVVGLYRNLSFTLVVHVKP
TILEVELANVDVHPYMFGKQHQLTCTVYGLPMPSITWFWQPCPSEPTLKQXVTISCNNTE
RIKVQHEDRGNYSHNSIKSINIKPELVQGKKKAVSTLVIGYAKMSGKYFCEAQNEVGSST
MQFPFYVDDETEGIAIKPRTAIVGDNVNLTCRASRYLYTDLQWLDSRNQTVTSNVSSLKF
SNYSISRSLYLHNVSKNSTKGYKCEAYKVNNRSELKTAALSMNERQQPWLSQNLTNRDVN
SSSTLVLSCIALGVPHPNITWYKNGIPVTGGPGITLGASGNLTIERVKKDDEGLYECIAS
NAEGVAKTSAVVTVLGEKPNIEVIILVCTGAAATFLWLMLILFIRKLRKQPAHYKMGPSI
IIDPDECPLEDQNDLLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKT
VAVKMLKGGATSNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEFCKYGNL
SNYLRSKRDDFIVYKSQDGKVVSSGSGCELSELMKRRLESVASTGSSASSGFIEDKSYCD
SEEEEEESEDLYKRILTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGAS
PYPGVQIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWHGEPLERPTFTELVERLGDLL
QASVQQEGKHYIPINTALLAKVGDLSATKTSEETPSRPLSHRDSGSTWNIKIRPASVKTF
DEVTMEDGTNENHESGQSDSGMGLSSDNMKTLKRLESLAGRPLSIMALAMKAASKSKESV
LTDTEKEKFPPTVSSLDFSLDDSALDDDLECHSPPPDYNYVVRYSTPPV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgatgataccatccgactgcctcaaattggctatcgtcttgtgttgctcatcgctcaca
aacggacattcggagagagagcaccacttgcctagaattcagccccctgagaatcccatc
attcttcataagggcgattcgctaaaccttatgtgcagaggtcatggccagctgaactgg
acattccagtccgtttcaccagaagaggagatgaaggagcagcagtgtgattccagacgt
caccctcgcttacgctgcagcaaactgcacatcgcacatttaagagccaatcacacaggg
atgtacagctgtaaagatggctcaaaccacgtcactagaacctacatctatgttaaagat
cctgagcaaccatttgtggagccccatgattcaacacctcacatcctgagcatcttcaga
catgagaccaaactcattatcccctgcaggacgtccgatcctgatactcaagtagagctg
ttagcgattccgagtcttggagaaaacattgttaaggaaaaaaaatgggatccaaaggtg
ggattcaagattccctacggtccctccgctgtgtacaatattatcacctgtgttaccatg
gcccatggtcgtcagttcaagtcaatgtacatccctaggagacggactattcatttggag
aatgtgaagattaccccagggaatgtcactctgctggttggagataccctgatgctcaac
tgtactggagatacctcctataatggaagaatcaatttcacctgggattttccagggata
aaagaaaatcgtcatttcacgaacaagaccagggacaaccctgctcaggtttttacaatg
agcaaggctttagtgttaccaaatattaccatggagaataaggggttttactattgcaat
gctgagattgaacccaaaaaatacaagacggtcgttgcaaacgttatggtctatgagcat
ccattcctcaacatctcctataagcaagaccgtcattctacagtgactgtcaaggaaggt
aaaaggaagtttgtctttgagcccatggtcaatgctctgccaaaaccagacataaaaaca
tggtctaaagatggggtccctatcgagaagaattccacctgttacaagatgaaggatttc
aacttgatcatcactgatttgcagcaaaagcatgctggtgtctataccataagcctgggc
aaccaagtggtgggcctgtacaggaatctgagctttactctggtagtccacgtaaagcca
actattttggaggttgagcttgcaaatgtggacgtgcatccgtacatgtttggcaaacag
catcagctaacctgcactgtttacgggttgcccatgccaagcatcacttggttctggcaa
ccgtgtccctcagagccgacacttaaacagtgagtcaccatctcttgcaataacacagag
cgaatcaaggtccaacatgaagacaggggaaattactctcacaactcgattaagagcata
aacatcaaacctgaactggttcaagggaaaaaaaaggctgttagtaccctggtgatagga
tacgccaagatgtcaggaaaatacttctgtgaggcccaaaatgaggttgggtccagcaca
atgcagttccctttctacgttgatgatgaaactgagggaattgccatcaaacctcgtaca
gccatcgtgggggataacgtcaatttgacctgtcgggcctctcgttacctctacacagat
ctacaatggttggattccaggaatcaaacagttacttctaatgtgtcaagtctaaagttc
agcaactactccatctcccgttctctttacctgcataatgtgtccaaaaacagcactaaa
ggttacaagtgcgaggcatacaaggtcaacaataggtctgaacttaagaccgctgcactt
agtatgaatgaaagacaacagccatggctgagtcaaaatctgacaaatcgggatgtgaac
agtagcagcaccctggtgctgtcttgcattgctctgggagttccccatcccaacatcaca
tggtacaaaaatggcattccagtgacaggaggcccaggtatcacactgggagcgagcggg
aatctgaccattgaaagggtgaagaaagatgatgagggtctgtatgagtgtatagccagc
aatgctgagggtgtcgcgaaaacaagtgctgtcgtcactgtgctcggagagaagccaaac
attgaggttatcattctggtgtgtacgggagctgcagctacgttcctctggctcatgctc
atcctcttcatccgcaagctaaggaagcaaccagcacactataagatgggtccatccatc
atcattgaccctgacgagtgtcccctcgaggatcagaatgacctccttcagtatgacagc
agcaaatgggagtttccccgcgaccgcctgcgactaggcaaaactcttggccatggagct
tttggaaaagtggtggaggcctcggcctttgggatcgacaagctctcaacctgcaagact
gttgctgtcaaaatgctgaaaggaggcgctacatcaaatgagcgaaaagctcttatgtcg
gagttaaagatcctgatccacattggtcatcacctgaacgtggtcaacctgctcggagct
tgcacaaagcctggaggtccattgatgatgatagtggagttctgcaaatacggtaacttg
tccaactatttgagaagcaagagagatgacttcattgtatacaagagccaggacggtaag
gtggtgtcatccggatcaggctgcgagctgagcgagctaatgaagcgccgcctggagagc
gtggccagcaccggaagctcagccagctctggcttcatcgaagataagagctactgcgac
tcagaggaagaggaagaagaatctgaggatttatataagaggatcctgacattggaagat
ttaatctgctacagtttccaagttgcaaaaggcatggagttcttggcctcacgcaagtgc
atccaccgtgatttggctgcacgaaacattctactgtctgagaataatgttgtgaagatt
tgtgatttcggacttgccagagacatctacaaagacccggattatgtgcgcaaaggagat
gctagactgccgctcaagtggatggcacccgaggccattttcgacaagatttacacgact
cagagtgacgtgtggtcctttggtgttctcatgtgggagatcttctctctgggtgcctcg
ccgtaccctggcgtccaaattgatgaggaattttgctgcaggctgaaagaagggaccagg
atgagagccccagaatactcttcttctgaaatatatcagaccatgttggactgctggcat
ggggagccactggagcggccaaccttcactgagctggtggaaagactgggagacctgctt
caggccagcgtgcagcaggaggggaagcactacatacccatcaacacagccctgctggcc
aaggtaggagacctgtctgccaccaagacgtcagaggagacgccatcaagacccctctcc
caccgtgactcagggagcacctggaacatcaagatccgtcccgctagcgtcaaaaccttc
gatgaggttaccatggaggatgggacaaatgagaaccacgagagcggtcagtcagacagt
gggatgggtttgtcctctgacaacatgaagactctgaagcgtctggagtcgttggcaggc
cgacctctgagcatcatggctctagcgatgaaggcagcaagtaagagtaaagagtctgtg
ctgaccgacactgaaaaggagaaattcccaccaacagtttcctctctggacttcagtctg
gatgactcagctctggatgacgacctggagtgtcacagcccgccgcctgactacaactat
gtggtgcgctactccaccccacctgtgtaa
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integrated database retrieval system
