Scomber japonicus (chub mackerel): 128363459
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Entry
128363459 CDS
T09718
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128363459
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Protocadherins
128363459
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128363459
NCBI-ProteinID:
XP_053180436
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Position
8:16706169..16708664
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AA seq
831 aa
AA seq
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MGFMERGIMSNKLPAWQVFLWWHHFLLLWSTIEGQTRYSIPEELKQGSVVGNLAKDLGLA
VSELYRRNLRITSEAGKQYFSMDLGKGELVVIDRIDREELCGQRPSCLLPLELVIDNPLQ
LHRVEIEILDTNDNSPSFLTKEKVVKIAELVNPGARFPLESAQDPDAGPNSVRSYLISKN
DHFKLTVKNHKDGRKIPELVLEKPLDRERMPIHNLILTAVDGGDPLRSGTSEITVIVLDN
NDNAPQFEKQVYETSISEKAKPGTEILHVKATDADEGLNGEIEYFFAEQTPDLILSLFDI
ESSTGAIVVKGILDHETNYLHRFDITAKDKGNPEMDGHCGVEIKIVDINDNIPEIFVTSL
TTPVPEDSAIGTVIALLSARDPDSGDNGKVTLSISSKSPFKLNPSVSNHYSLVTNGPLDR
EKNSHYTVEIRATDAGKPPLSNEKVILVELLDVNDNPPVFAQSSYVIYVKENQAPGKILC
SVSATDPDSGDNAKISYSILDSRVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVT
AVDADSGHNAWISYKLAEATDASLFTVNQYTGEVRTKRPVSEQDDSSQRLLIEVKDDGEP
VQSATVTVSILLEDGLHEPILDLRQKTMEPSKKTGRITLYLILSLASVSVLSLVTFLILA
VKCIRSSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSKTKRRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggatttatggaacgaggaataatgtcgaataaattgcctgcatggcaggtgtttttg
tggtggcatcatttcttgctattatggagtacaatagaggggcagactcgctacagcatc
ccggaggaattgaaacagggttctgtggtaggaaatttagccaaagatctgggtttggct
gtatctgaactgtaccgacgtaatttgcggataacatcggaagctggtaagcagtatttt
agtatggacttggggaagggagaactggtggtgattgataggatagatagggaagaactg
tgtggacaaagaccgtcatgtttgttgcctttggaacttgtcatagataaccccctgcag
ctgcatagagtcgagattgaaatactggatacaaacgataattctccgagttttctcact
aaagagaaagtggtgaaaattgcagagctggtcaatccaggcgcgcgatttccactcgaa
agtgcacaggatcccgatgctggccctaattctgtacgatcttacctcataagtaaaaac
gaccatttcaaattaactgttaaaaaccacaaggacggaaggaaaatcccagaactagtc
cttgaaaaaccactcgatcgagaaaggatgcctatacacaatctcatcctcacagctgta
gatggtggagatccgttgcgctcagggacatcagaaattacagttatagtacttgacaat
aatgataatgcgccacagtttgaaaaacaggtatatgagactagtatcagcgaaaaggca
aaacctggaacagagatattacatgttaaagctactgatgcagacgaaggactaaatgga
gaaatagaatacttttttgcagaacaaacaccggatctgattttatcattatttgacatt
gaatcctctactggagctattgttgtgaaagggattttagatcatgaaacaaattatttg
catagatttgacataactgctaaagacaaaggtaaccctgaaatggatgggcattgtggc
gtcgaaataaaaatagttgacattaatgacaatattcctgaaatatttgttacatcttta
acaacacctgttccagaagattctgccattggaacagttattgcactgttaagtgcaaga
gacccggattcaggtgacaatggcaaagttactttaagcatttcttcaaaatcccccttc
aagttaaatccatcggtctctaatcattactcattagtgacgaacggaccacttgaccgt
gaaaaaaatagccactatactgttgagatacgtgctacagatgctggaaaacccccattg
tcgaatgaaaaagtaatacttgttgaattgttagatgtaaatgataacccaccagttttc
gctcagtcctcctacgtcatttatgtaaaagagaatcaagcacctgggaaaatcctgtgc
tcagtgtcagcaactgatccagattcaggtgacaacgctaaaatctcttactctatactg
gactctagagtgcaggacgtttctgtctcgtcttatgtttacattaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagattcaggtt
caggcaaaggaccagggctctccgtctctcagcagcaacgctactgtccatgtttttatc
ctggaccagaacgacaatgcccccgctgtcatttacccctcctccgctgccctgggctcc
ctctctcatcagaggatgccccgctccgctaaaccgggtcacctggttactaaggtgacg
gccgtggacgctgactcgggccataacgcctggatctcctacaaactggcggaggccaca
gacgcctctctgttcacagttaatcagtacacaggggaggtgaggactaaacgccctgtg
tccgagcaggacgactcctctcagaggctgcttatagaggtcaaggacgacggggaaccg
gtccagtccgccacagtcacggtgtccatcctgctggaggacggcctccatgagcccatc
ttggacctccgacagaaaacgatggagccgagtaagaaaaccgggagaatcaccctttat
ttgattctctctctggcctcggtgtccgtgctgtctctggtgacttttctcattttagcg
gttaaatgcatcaggagcagcagaagcagcggtagttgctgcatgagacggagcgactgt
gatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatgggcctata
aagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcaggtcctgt
atgtctccaatgtcagagtacagtgatttcactttgattaaacccagcagcaccactgac
tttaaggaggtgatcagtgttcttgatgcttctttacctgacagcacctggacctttgag
agccagcaggtgagcaaaacaaaacgtagactttag
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