Scomber japonicus (chub mackerel): 128365057
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Entry
128365057 CDS
T09718
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00514
Other types of O-glycan biosynthesis
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128365057
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128365057
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128365057
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
128365057
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128365057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
TAGT
Motif
Other DBs
NCBI-GeneID:
128365057
NCBI-ProteinID:
XP_053181655
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All DBs
Position
2:8361089..8397682
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AA seq
299 aa
AA seq
DB search
MHRRWVRRSLPLFIFTFFIILYVDFQLRTSSLPKLSAAHHPSPGAHQRSIQQVPIAAKGA
QKPVSKSSSSSSNNNGAGGGNLHVAKERHITPEGARVTQAKLKQEDIFIAVKTTGRFHRT
RLALLLETWISRTKAHTFIFTDTEDEELSSEVWPKMHLIHICVCLCVSTQREVQFWFATG
GAGFCLSRRLAEKMAPWASGTRFEKTSATIRLPDDCTVGFIVEKRLGISMVHCPLFHSHL
ENLLLIRHRHIPHQATLSYGIFENKMNSIEVKGGFSKEEDPSRFKTVHCMLYPLTSWCP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcataggagatgggtacgtcggagtttgcctctcttcatttttactttcttcattatt
ctgtacgtggattttcaattacgcaccagcagccttcccaaactcagcgcggctcaccat
ccatcacccggtgcgcaccagcgctccatccagcaggttcccatcgcggccaagggcgca
cagaaaccggttagtaaaagcagcagcagcagcagcaacaacaacggtgctggtggtggt
aacctacatgtcgcgaaggaaagacacatcacccccgagggtgcacgtgtcacccaggca
aaactgaagcaggaggacatcttcatcgctgtgaagaccaccgggaggttccacaggacg
cgtcttgcgctccttttggagacgtggatctccagaaccaaggcgcatacgttcattttc
acagacacggaggatgaggaattaagttcagaggtgtggccaaaaatgcatcttattcat
atctgtgtgtgtttgtgtgtttccactcagagagaagttcagttctggttcgcgacagga
ggagcaggattctgtctgagtcgacggctggcggagaagatggcgccctgggccagtggc
acccggtttgagaagacgtcagcgactatccgtctccctgacgactgtacggtgggcttc
atcgtggagaagaggctgggtatctctatggtccactgtcctttatttcactctcacctg
gaaaacctgctgctcatccgccacagacacataccacaccaggcgacgctgagctacggg
atatttgaaaataagatgaatagcattgaagtgaaaggaggcttctccaaagaggaagac
ccctcaaggtttaagaccgtccactgcatgctgtaccctttaaccagctggtgtccttga
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