Scomber japonicus (chub mackerel): 128365222
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Entry
128365222 CDS
T09718
Symbol
polk
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128365222 (polk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128365222 (polk)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128365222 (polk)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
128365222 (polk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
DUF4363
zf-C2H2_12
IDO
Sgf11
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
128365222
NCBI-ProteinID:
XP_053181858
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All DBs
Position
9:23858502..23865433
Genome browser
AA seq
875 aa
AA seq
DB search
MENGVASTKGEGFLSRMALNDNKAGMEGLDRDKINKIIMESSKGSRFYENEVKKEQQVNQ
RIEKMMQQKEQITEQQLKNAQAQVERLASELENSRNLSHLIVHVDMDAFYAAVEMRDCPE
LKDKPMAVGSMSMLSTSNYHARKFGVRAAMPGFIAKKLCPNLVIVPTNFGKYRAVSDEIR
EIFADYDPHFQPMSLDEAYLDFTDHVKLRESWPESSRTHRFRTNKTGEEQIDPHESVPEV
RDLSPVLFEDSPSSSPCLLSPEGVGAAGGAFEVFGTSVEEAVREMRFRIEQKTMLTASAG
IAPNTMLAKVCSDKNKPNGQYRLPSTREAVMDFIQNLPVRKVSGIGKVSEKMLNALGISS
CSHLSQQMALLSLLFSETTCQHFMQVSLGLGSTYIARHEERKSMSTERTFRELNKAEEQL
SLCRELCEDLAEDMKKEDLKGKTVTLKLKSVNFEVKTRAVTLPYAVATVDEIYAAAKDLL
KTEIENESPQPLRLRLMGVRISAFISSDDKKPLQKSIIGFLQPGKTDSTSSYQLEREHLS
SCPPLVQKCQRREEIPWRTKLWGIKEGQTSDEPQMSFFQKAHAKRLQLQAVSASTQEEVH
EEKASVITSTGNHAHESVKSSINGQRSESNCEASGLSENDSFSLSDAHATTSGCGGRVSE
SLTCPVCFRQVETTDLNVFNQHIDQCLSDVSRKPNQITVSDSESDQDGENDHEECEVIDK
WRRESEAQNKQESNKPDSPQDQHNLKNDSSQTVLLINGENGPVTLQQPQSCNGKGPVLIC
PVCQLTQDTNDLTMFNRHVDLCLNQEVLHELGGQTSSSINLPSVTVTNTKVTDKGHLLLR
QTSKAKTKRRDTPSSPPSKKARGPGPRNTIDKFLR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggggttgcctccactaaaggagagggcttcctgtccagaatggccctcaat
gacaacaaagctggtatggagggtcttgacagggataagatcaacaagatcatcatggag
tcatccaagggatccaggttttatgagaatgaggtgaagaaagagcagcaggtgaaccag
cgcattgagaaaatgatgcaacaaaaggaacagattacagaacaacagctaaagaacgca
caggctcaggtggagaggttggcctccgagctggagaacagccgcaatttaagtcattta
attgtacatgtggacatggacgctttctacgctgctgtggaaatgagagattgtcctgag
ctgaaggacaagcccatggctgttggatctatgagcatgctgtcaacatctaactaccac
gccaggaagtttggagttcgagctgccatgcctggcttcattgcaaagaaactctgcccc
aacttagtcattgttccaaccaactttggcaaatacagagctgtgagtgatgagatccgg
gagatttttgcagactatgaccctcatttccagccaatgagcctagatgaagcttatctg
gattttacagaccacgtgaaactgagggagagctggcctgaatcctcacgaacacaccgt
ttccgcaccaacaaaacaggtgaagagcagattgatccccatgagtcagtgccagaggtg
agagacctctctcctgttctgtttgaggacagcccaagctcctctccctgcttgttgagc
ccagaaggtgttggtgcagctggtggggctttcgaagtgtttgggacgtctgttgaggag
gctgtgagagagatgcgcttccgaattgagcagaagaccatgctgactgccagtgcaggc
attgctccaaacacgatgcttgccaaagtgtgcagtgacaagaacaagcccaacggccaa
tacagactcccgtccaccagagaggcagtcatggacttcatccagaacctcccagttcgc
aaagtttctggcatagggaaggtgagtgagaaaatgctgaatgcgttgggcatcagcagc
tgttctcatctcagccagcagatggcgttgttgtcattgttgttctcggagacaacctgt
cagcatttcatgcaggtttccctgggtttgggctccacatacatagcgagacacgaggaa
agaaaaagcatgagcactgagaggacatttagagaattaaataaggctgaggaacagttg
tctttatgtagagagctctgtgaagacttagcagaagacatgaagaaagaagatctgaag
ggtaaaacagtaacactgaagctgaagagcgtgaactttgaagtgaaaaccagggcagtg
acactgccatatgctgttgctacagtggatgagatctatgctgctgccaaagacctgctg
aaaacagaaatagaaaatgaaagccctcagccactcagactgagactcatgggtgttcga
atctctgcctttatcagttcggatgataaaaagcctctgcagaagagcatcattggtttc
ctccagccaggcaagacagactctaccagctcttaccagcttgagagggagcatctctct
tcttgtcctccgctggtgcagaagtgccagagacgggaggaaattccctggcggactaag
ctatgggggataaaggagggtcagactagtgatgaaccccagatgtctttcttccaaaag
gcccatgccaaaagactacaactccaggcagtgagtgcaagcacacaagaggaagtccac
gaggaaaaggcttctgtgattacctccacaggcaatcatgctcatgagagcgtgaagtca
tcgataaatggacagaggtcagagagtaactgtgaagcatctggtctctcagaaaatgac
agtttttccctctcagatgctcatgctaccacatcaggctgtggtggcagagtgtcagag
agcctcacctgtcctgtgtgtttcaggcaggtggagacaactgatttgaatgtcttcaac
caacatatagaccagtgtctcagtgatgtttctagaaagccaaatcaaatcacagtttct
gactcagagtcagatcaggatggcgagaatgaccatgaagaatgtgaagtgattgacaaa
tggaggagggagtctgaggctcaaaacaagcaggagtcaaacaaacctgattccccgcaa
gaccaacacaacttgaaaaatgattcaagccaaacagttttgctgatcaatggtgaaaat
ggaccagtgactttgcagcagcctcagtcatgtaatggtaaaggtcctgtcctaatctgc
ccagtatgtcagctgacgcaggacacaaatgacctcactatgttcaatcgtcatgttgac
ctctgcctgaaccaggaagtactgcatgagctggggggacagacatcatcttccattaat
ctaccttcagttacagtaacaaacaccaaagtgacagacaaaggccatctcctgttaagg
caaacaagtaaagcaaaaactaaaagacgggacactccttcctctccaccctctaaaaag
gcgagaggccctggtcctcgcaacaccatcgacaagttccttaggtga
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