Scomber japonicus (chub mackerel): 128365819
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Entry
128365819 CDS
T09718
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128365819 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128365819 (phc1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
128365819 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SPAN-X
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128365819
NCBI-ProteinID:
XP_053182389
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Position
10:complement(8836706..8844060)
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AA seq
787 aa
AA seq
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MDAGEDQNTGTTNGNPQTSGNSRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQLHNLAAVQQATLAASRQSNTPNNSMSQAPTTVNLSTTSAGGTMTNPRPHGPAT
SATTTALNQSVLLGGNSAGQGQMYLRVNRSLRAPLASQLIFMPGGTATATVATVAQTQPQ
QQQQQQPQHEVAPTTASAQSDNDQVQNLALHCASTPRVVAVKSELPDRKDAASFPLGQQQ
TFPQQQQVQPQQQQQMAKPNFAQQSTTNTMAVKAGNQATMTVTPAATVAPSSSSSPALPL
SQLLLSSSAAPVILVPTSNVTTSTQGYPIGSVAPKANVNTQTLVVQPLQQASTTADKGPV
PIQPKTAQGHRLPVQMPPRHPLPILPAPPSNSHNPPHIPVQLVGARQCLAGNVQAVALAQ
TRSSATQDSIAGGNVNAVSHNSATTMTKPAIGSLKRKSDCDASNEMAAESSDCTPMKDSA
PPLSPAPTKDSAPLVAASFSSPPTLSLPLPLSRVVHGDKDRAPVPQAVVKPQVLTHLIEG
FVIQEGAEPFPVAGLLKDRDFALVGRSENGAPLLKCEYCGSLAPASQFRGSKRFCSNTCA
KRYNVSCSQHFKTSRGRGGAGLASPPAPTESTARRRGPSRRSSSDMNKISSRHLAVKCHS
ESSRSEDVSSDGEEEEEDDSPSLSPSSSHSCSRAENSAPQSDSSAPGSLPLDGANFLSAT
PAQWSVEEVCRFIASLQGCEELAAQFLSQEIDGQALLLLREDHLISTMNIKLGPALKICA
SINSLRE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgaagaccaaaacacaggcaccaccaatggaaatcctcagacaagtggg
aactcccgcccaccccagatagcccacatgtctctgtatgagagacaggctgtgcaggct
ctccaagctctgcaaagacaaccgaatgcagctcagtacttccagcaactcatgctgcag
cagcagatcaatagtgcccaactccacaacttggctgctgtgcaacaggctacacttgca
gctagtcgccagtccaatactccgaataacagcatgtcccaagcgcccaccactgtcaac
ctaagcaccacatctgcagggggtaccatgactaatcctcgtccccacggcccggccacc
tctgcgacaacgacggcgctcaaccagtcagtgttgctgggtggaaactcagcaggacag
gggcagatgtatcttagggtcaaccgttctctcagggctccccttgcctctcagctcatc
ttcatgcctggtggtacagcaacagctactgtagcaacagtcgctcagacacagccccag
cagcaacaacagcaacagccacagcatgaagttgctcctaccacagccagtgcccagtct
gacaatgatcaggttcagaatctagccctacattgtgcttccactcccagagtagttgct
gtcaagtctgaactccctgacagaaaagatgctgccagctttccacttggccaacagcag
actttcccccagcagcagcaagtacaaccacaacagcaacaacaaatggccaaacccaac
tttgcacagcagtccaccaccaacactatggctgtaaaggctggaaaccaggctacaatg
actgttactcctgctgctactgtagctccttcctcctcctcctcccctgcactccctctc
tctcaactccttttgtcttcctccgctgcccctgtgatcctggttcccacctccaacgtt
actacctccacccagggttaccccatcggctcagtggctccaaaagccaacgttaacaca
cagacactggtggtgcaacccctacaacaagccagcacaacagcagataagggccctgtg
cctatccagcccaaaacggctcagggacaccgcttacctgtgcagatgcccccacgacac
ccacttcccattctcccagcaccacctagcaacagccacaatcctccccacattcctgtc
cagcttgtgggagccaggcagtgcttagcaggaaacgtgcaggctgtggccctcgctcag
acaaggagcagtgcaacccaggacagtatagctggtgggaatgtgaacgcagtctcccac
aacagtgccaccactatgacaaagcctgccatcggctcgctgaagagaaaatctgactgt
gatgcatcaaatgagatggcagcagaatcttcagactgtacaccaatgaaggattctgct
cctccgttatccccggccccgacaaaggattcagctcctcttgtagctgcgtccttctct
tctcctcccaccctgtccttgcctctgcccttgtcaagagttgtgcacggggacaaagac
agagcacctgttcctcaggcagtggtcaagcctcaagttctcacccatctcatagagggt
tttgtcatccaggaaggagctgagcctttccctgttgctggacttctcaaagatagagat
tttgccctggttgggcgctcagagaatggagctcctttgttgaagtgtgagtactgcgga
agccttgctccagccagccagtttagaggatccaagaggttctgttcgaatacttgtgct
aagaggtataatgtaagctgcagccaacacttcaagacaagcagagggagaggtggtgca
gggctagcatcacctccagcacccaccgagagcactgctaggcgccggggtccctctcgc
aggagcagttctgatatgaataaaatatcaagccgacatctcgcagtcaagtgtcactct
gagtccagtcgctcagaggatgtatccagtgatggagaggaagaagaggaggacgattct
ccttcactttctccaagctcttcacactcctgctccagagcagagaacagcgctcctcag
tctgacagctcagcacctggcagcctcccactggatggagcgaacttcctctcagcaacg
cctgctcaatggagcgtggaagaagtctgcaggtttatcgcttcacttcaaggctgcgag
gagctagctgcccagtttctgtcacaggaaatagacgggcaggctttgctgcttctgcgt
gaggaccatctcatttccaccatgaatatcaagctgggtcctgccctcaagatctgtgcc
tccattaacagcctgcgtgaatga
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