Scomber japonicus (chub mackerel): 128365852
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Entry
128365852 CDS
T09718
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04150
mTOR signaling pathway
sjo04210
Apoptosis
sjo04217
Necroptosis
sjo04920
Adipocytokine signaling pathway
sjo05132
Salmonella infection
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128365852 (tnfrsf1a)
04150 mTOR signaling pathway
128365852 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128365852 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128365852 (tnfrsf1a)
04217 Necroptosis
128365852 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128365852 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128365852 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
128365852 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sjo04050
]
128365852 (tnfrsf1a)
04090 CD molecules [BR:
sjo04090
]
128365852 (tnfrsf1a)
Cytokine receptors [BR:
sjo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128365852 (tnfrsf1a)
CD molecules [BR:
sjo04090
]
Proteins
128365852 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Beta-lactamase2
BLTP1_M
Motif
Other DBs
NCBI-GeneID:
128365852
NCBI-ProteinID:
XP_053182439
LinkDB
All DBs
Position
10:complement(8620696..8629233)
Genome browser
AA seq
393 aa
AA seq
DB search
MMEGARHSWGWIRKACFGTILILLCMFISTSTSLQPTSQSVKQKCPDGDYSNDKGICCNK
CSPGFKLLNECQAVRERSECVPCPDGQFMDQLNFSPNCFSCKRCKAKYNEILVSKCEPYK
NTICRCKDGYYKKDIDSGTYECLRCKTCRSDEQEKQPCTPENNTLCGCKENYYKEKGKCV
ACKDCSSGCEHLCPVTVQTTKGQKEEDGRWIIIIAVLSSVALILVVVGCPATYILTTWLT
KRRILRETSQASVTPDSLEILVKNEEPSEKYVNAIPQSPVNEQEIPNLPDCVPLEIKIPD
LIYMVLDLVPVLQVKQLVRSLGVTDTEIERAEMDHRTCKESHYQMLRVWAEQGSRAGRGG
MLHRPLLLELLDKLRTMHLGQAAEELETKYGIQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggagctcgacacagttggggatggattagaaaagcctgttttggcacaata
ttgatcctcttgtgcatgttcatctccacttctacatccttacaaccaacctcacaatca
gttaagcagaagtgtccagatggggattattccaatgacaagggaatatgttgcaacaaa
tgctctccaggttttaagctcttgaacgagtgtcaggctgtgcgtgaaaggagtgaatgt
gtgccatgtccagatggacagttcatggaccagctgaacttctccccaaactgtttcagt
tgcaaacgttgcaaagcaaaatataatgaaatcttggtatcaaaatgtgaaccatacaaa
aacactatttgtcgctgtaaagacggttattacaaaaaggacatcgactcaggaacatat
gagtgtttgagatgtaaaacgtgtcggtctgatgaacaggaaaaacaaccatgtacacca
gagaacaacactttgtgtggatgtaaggagaattactacaaagaaaagggcaagtgtgta
gcatgcaaagactgttcatctggctgtgaacatctctgtccagttactgttcagaccaca
aaaggtcaaaaggaggaagatggaagatggatcattataattgctgtgctttcaagtgtg
gcattaatattagttgtggtggggtgtcccgccacctatatcctcaccacatggctcacc
aagaggaggatactgagagagacctcccaagcatctgtcaccccggactcacttgagatc
ctggtcaaaaatgaagaaccctcagagaagtatgtgaatgccattccccaaagccctgtg
aatgagcaggaaatacccaatctgcctgactgtgtcccactggaaatcaagatccctgac
ctgatctacatggtgctagacctggtaccagtgctgcaggtgaagcagctggtgcgttct
ctcggtgtgacggatacagagatcgaacgagcagagatggatcaccggacctgcaaggag
tctcactaccagatgctgagggtgtgggcagaacaaggatcacgagcaggacgaggtgga
atgctgcaccggccgttgttgctggagttgttagataaactgagaacgatgcacctggga
caggcagccgaagagctggagacaaagtatggcattcagtaa
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